Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A087WNV1 | Agfg1 | Arf-GAP domain and FG repeat-containing … | Mus musculus (Mouse) | 521 aa |
Protein Details: A0A087WNV1 (Agfg1)
Protein Information
| Accession | A0A087WNV1 |
|---|---|
| Protein Names | Arf-GAP domain and FG repeat-containing protein 1 (HIV-1 Rev-binding protein homolog) (Nucleoporin-like protein RIP) |
| Gene Symbol | Agfg1 |
| Organism | Mus musculus (Mouse) |
| Length | 521 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAASAKRKQE11EKHLKMLRDM21TGLPHNRKCF31DCDQRGPTYV41NMTVGSFVCT
51-10051SCSGSLRGLN61PPHRVKSISM71TTFTQQEIEF81LQKHGNEVCK91QIWLGLFDDR
101-150101SSAIPDFRDP111QKVKEFLQEK121YEKKRWYVPP131EQAKVVASVH141ASISGSSASS
151-200151TSSTPEVKPL161KSLLGESAPA171LHLNKGTPSQ181SPVVGRSQGQ191QQEKKQFDLL
201-250201SDLGSDIFAA211PAPQSTATAN221FANFAHFNSH231AGGSAGSVNA241NFAHFDNFPK
251-300251SSSADFGTFS261TSQSHQTAST271VSKVSTNKAG281LQTADKYAAL291ANLDNIFSAG
301-350301QGGDQGSGFG311TTGKAPVGSV321VSVPSHSSAS331SDKYAALAEL341DSVFSSAATS
351-400351SNAYTPTSNA361SSSVFGTVPV371GASAQTQPAS381SGPAPFGATP391STNPFVAATG
401-450401PSAASSTNPF411QTNARGATAA421TFGTASMSMP431AGFGTPAQYS441LPTSFSGSFQ
451-500451QPAFPAQAAF461PQQTAFSQQP471NGAGFATFGQ481TKPVVTPFGQ491VAAAGVSSNP
501-521501FMTGAPTGQL511PTGSSSTNPF521L
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | Arf-GAP domain and FG repeat-containing protein ArfGAP domain superfamily Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
Deep-Palm: 0.10
|
|
| 32 | Arf-GAP domain and FG repeat-containing protein ArfGAP domain superfamily Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
Deep-Palm: 0.10
|
|
| 49 | Arf-GAP domain and FG repeat-containing protein ArfGAP domain superfamily Arf GTPase activating protein ARFGAP/RecO-like zinc finger | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.29
|
|
| 52 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.31
|
|
| 89 | - | - | - |
Deep-Palm: 0.64
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.