Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A087WT55 | DCP1A | 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase (EC 3.6.1.62) | Homo sapiens (Human) | 260 aa |
Protein Details: A0A087WT55 (DCP1A)
Protein Information
| Accession | A0A087WT55 |
|---|---|
| Protein Names | 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase (EC 3.6.1.62) |
| Gene Symbol | DCP1A |
| Organism | Homo sapiens (Human) |
| Length | 260 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31382980 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEALSRAGQE11MSLAALKQHD21PYITSIADLT31GQEKTDIEGT41LFVYRRSASP
51-10051YHGFTIVNRL61NMHNLVEPVN71KDLEFQLHEP81FLLYRNASLS91IYSIWFYDKN
101-150101DCHRIAKLMA111DVVEEETRRS121QQAARDKQSP131SQANGCSDHR141PIDILEMLSR
151-200151AKDEYERNQM161GDSNISSPGL171QPSTQLSNLG181STETLEEMPS191GSQDKSAPSG
201-250201HKHLTVEELF211GTSLPKEQPA221VVGLDSEEME231RLPGDASQKE241PNSFLPFPFE
251-260251QLGGAPQSET
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 102 | - | - | - |
Deep-Palm: 0.12
|
|
| 136 | - | - | - |
Deep-Palm: 0.62
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
U937 cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 31 | G → C | 0.002506 | SNP | Missense Mutation | COAD |
| 39 | C → C | 0.001887 | SNP | Silent | UCEC |
| 117 | R → C | 0.002506 | SNP | Missense Mutation | COAD |