Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A087WWQ2 | N/A | 18S rRNA (pseudouridine(1248)-N1)-methyltransferase (18S rRNA … | Homo sapiens (Human) | 223 aa |
Protein Details: A0A087WWQ2
Protein Information
| Accession | A0A087WWQ2 |
|---|---|
| Protein Names | 18S rRNA (pseudouridine(1248)-N1)-methyltransferase (18S rRNA Psi1248 methyltransferase) (Nucleolar protein EMG1 homolog) (Protein C2f) (Ribosome biogenesis protein NEP1) |
| Gene Symbol | Not available |
| Organism | Homo sapiens (Human) |
| Length | 223 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501KMAAPSDGFK11PRERSGGEQA21QDWDALPPKR31PRLGAGNKIG41GRRLIVVLEG
51-10051ASLETVKVGK61TYELLNCDKH71KSILLKNGRD81PGEARPDITH91QSLLMLMDSP
101-150101LNRAGLLQVY111IHTQKNVLIE121VNPQTRIPRT131FDRFCGLMVQ141LLHKLSVRAA
151-200151DGPQKLLKVI161KNPVSDHFPV171GCMKVGTSFS181IPVVSDVREL191VPSSDPIVFV
201-223201VGAFAHGKVS211GSYLFQSKVM221MAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 67 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.90
|
|
| 135 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.82
|
|
| 172 | - | - | - |
Deep-Palm: 0.60
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.