Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A0A6YY59 | Nmd3 | 60S ribosomal export protein NMD3 | Mus musculus (Mouse) | 144 aa |
Protein Details: A0A0A6YY59 (Nmd3)
Protein Information
| Accession | A0A0A6YY59 |
|---|---|
| Protein Names | 60S ribosomal export protein NMD3 |
| Gene Symbol | Nmd3 |
| Organism | Mus musculus (Mouse) |
| Length | 144 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEYMAESIEH11SPGHILCCEC21GVPISPNPAN31ICVACLRSKV41DISQGVPKQV
51-10051SISFCKQCQR61YFQPPASWVQ71CALESRELLA81LCLKKIKAPL91SKVRLVDAGF
101-144101VWTEPHSKRL111KVKLTIQKEC121WNYRCVPACL131ALCGGENQTQ141GFKH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
Deep-Palm: 0.06
|
|
| 18 | - | - | - |
Deep-Palm: 0.06
|
|
| 20 | Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.08
|
|
| 32 | Nmd3, N-terminal Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.87
|
|
| 35 | Nmd3, N-terminal Ribosomal export protein Nmd3 | - | - |
Deep-Palm: 0.88
|
|
| 55 | - | - | - |
Deep-Palm: 0.20
|
|
| 58 | - | - | - |
Deep-Palm: 0.23
|
|
| 71 | - | - | - |
Deep-Palm: 0.96
|
|
| 82 | - | - | - |
Deep-Palm: 0.98
|
|
| 120 | - | - | - |
Deep-Palm: 0.62
|
|
| 125 | - | - | - |
Deep-Palm: 0.63
|
|
| 129 | - | - | - |
Deep-Palm: 0.26
|
|
| 133 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.