Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A5F9UJV3 | AP3B2 | AP-3 complex subunit beta | Homo sapiens (Human) | 1088 aa |
Protein Details: A0A5F9UJV3 (AP3B2)
Protein Information
| Accession | A0A5F9UJV3 |
|---|---|
| Protein Names | AP-3 complex subunit beta |
| Gene Symbol | AP3B2 |
| Organism | Homo sapiens (Human) |
| Length | 1088 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26876311 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSAAPAYSED11KGGSAGPGEP21EYGHDPASGG31IFSSDYKRHD41DLKEMLDTNK
51-10051DSLKLEAMKR61IVAMIARGKN71ASDLFPAVVK81NVACKNIEVK91KLVYVYLVRY
101-150101AEEQQDLALL111SISTFQRGLK121DPNQLIRASA131LRVLSSIRVP141IIVPIMMLAI
151-200151KEAASDMSPY161VRKTAAHAIP171KLYSLDSDQK181DQLIEVIEKL191LADKTTLVAG
201-250201SVVMAFEEVC211PERIDLIHKN221YRKLCNLLID231VEEWGQVVII241SMLTRYARTQ
251-300251FLSPTQNESL261LEENAEKAFY271GSEEDEAKGA281GSEETAAAAA291PSRKPYVMDP
301-350301DHRLLLRNTK311PLLQSRSAAV321VMAVAQLYFH331LAPKAEVGVI341AKALVRLLRS
351-400351HSEVQYVVLQ361NVATMSIKRR371GMFEPYLKSF381YIRSTDPTQI391KILKLEVLTN
401-450401LANETNIPTV411LREFQTYIRS421MDKDFVAATI431QAIGRCATNI441GRVRDTCLNG
451-500451LVQLLSNRDE461LVVAESVVVI471KKLLQMQPAQ481HGEIIKHLAK491LTDNIQVPMA
501-550501RASILWLIGE511YCEHVPRIAP521DVLRKMAKSF531TAEEDIVKLQ541VINLAAKLYL
551-600551TNSKQTKLLT561QYVLSLAKYD571QNYDIRDRAR581FTRQLIVPSE591QGGALSRHAK
601-650601KLFLAPKPAP611VLESSFKDRD621HFQLGSLSHL631LNAKATGYQE641LPDWPEEAPD
651-700651PSVRNVEVPE661WTKCSNREKR671KEKEKPFYSD681SEGESGPTES691ADSDPESESE
701-750701SDSKSSSESG711SGESSSESDN721EDQDEDEEKG731RGSESEQSEE741DGKRKTKKKV
751-800751PERKGEASSS761DEGSDSSSSS771SESEMTSESE781EEQLEPASWS791RKTPPSSKSA
801-850801PATKEISLLD811LEDFLSTPTV821TPPSVQPVSP831PAIVSTSLAA841DLEGLTLTDS
851-900851TLVPSLLSPV861SGVGRQELLH871RVAGEGLAVD881YTFSRQPFSG891DPHMVSVHIH
901-950901FSNSSDTPIK911GLHVGTPKLP921AGISIQEFPE931IESLAPGESA941TAVMGINFCD
951-1000951STQAANFQLC961TQTRQFYVSI971QPPVGELMAP981VFMSENEFKK991EQGKLMGMNE
1001-10501001ITEKLMLPDT1011CRSDHIVVQK1021VTATANLGRV1031PCGTSDEYRF1041AGRTLTGGSL
1051-10881051VLLTLDARPA1061GAAQLTVNSE1071KMVIGTMLVK1081DVIQALTQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 84 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.96
|
|
| 210 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.74
|
|
| 225 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.72
|
|
| 436 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.76
|
|
| 447 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.85
|
|
| 512 | - | - | - |
Deep-Palm: 0.93
|
|
| 664 | - | - | - |
Deep-Palm: 0.91
|
|
| 949 | - | - | - |
Deep-Palm: 0.50
|
|
| 960 | - | - | - |
Deep-Palm: 0.10
|
|
| 1011 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.42
|
|
| 1032 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.92
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
frontal cortex
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 100 | Y → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 127 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 127 | R → C | 0.004283 | SNP | Missense Mutation | SKCM |
| 132 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 435 | R → C | 0.007299 | SNP | Missense Mutation | READ |
| 444 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 444 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 576 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 580 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 654 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 654 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 707 | S → C | 0.002506 | SNP | Missense Mutation | COAD |
| 710 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 844 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 954 | C → C | 0.002294 | SNP | Splice Region | OV |
| 1026 | C → Y | 0.002747 | SNP | Missense Mutation | LIHC |