Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A0A8I5KRB3 | ARL6IP6 | ADP ribosylation factor like GTPase … | Homo sapiens (Human) | 153 aa |
Protein Details: A0A8I5KRB3 (ARL6IP6)
Protein Information
| Accession | A0A8I5KRB3 |
|---|---|
| Protein Names | ADP ribosylation factor like GTPase 6 interacting protein 6 (ARF like GTPase 6 interacting protein 6) |
| Gene Symbol | ARL6IP6 |
| Organism | Homo sapiens (Human) |
| Length | 153 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 32944167 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSFAESGWRS11ALRRRGPGTP21GPVARPSYSS31FTQGDSWGEG41EVDEEEGCDQ
51-10051VARDLRAEFS61AGAWSEPRKR71SVLPPDGNGS81PVLPDKRNGI91FPAAAGSRAQ
101-150101PRRWPVQVLS111ILCSLLFAIL121LAFLLAIAYL131IVKELHAENL141KNEDDVDTGL
151-153151LGN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 48 | - | - | - |
Deep-Palm: 0.95
|
|
| 113 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Jurkat T cell
Specificity: 0.500
2/2 (100.0%)
2
PC3
Specificity: 0.500
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 48 | C → Afs*83 | 0.001969 | DEL | Frame Shift Del | HNSC |
| 89 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 169 | S → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 172 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |