Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2A7F6 | Clcn6 | Chloride channel protein | Mus musculus (Mouse) | 873 aa |
Protein Details: A2A7F6 (Clcn6)
Protein Information
| Accession | A2A7F6 |
|---|---|
| Protein Names | Chloride channel protein |
| Gene Symbol | Clcn6 |
| Organism | Mus musculus (Mouse) |
| Length | 873 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 31772009 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGCRGSVCC11CCRWCCCCGE21RESRTPEELT31ILGETQEEED41EILPRKDYES
51-10051LDYDRCINDP61YLEVLETMDN71KKGRRYEAVK81WMVVFAIGVC91TGLVGLFVDF
101-150101SVRLFTQLKF111GVVQTSSAAV121EECSQKGCLA131LSLLELLGFN141LTFVFLASLL
151-200151VLIEPVAAGS161GIPEIKCYLN171GVKVPGIVRL181RTLLCKVFGV191LFSVSGGLFV
201-250201GKEGPMIHSG211AVVGAGLPQF221QSISLRKIQF231NFPYFRSDRD241KRDFVSAGAA
251-300251AGVAAAFGAP261IGGTLFSLEE271GSSFWNQGLT281WKVLFCSMSA291TFTLNFFRSG
301-350301IQFGSWGSFQ311LPGLLNFGEF321KCSDSDKKCH331LWTAMDLGFF341VVMGVIGGLL
351-400351GATFNCLNKR361LAKYRMRNVH371PKPKLVRVLE381SLLVSLVTTV391VVFVASMVLG
401-450401ECRQMSSTSQ411TGNGSFQLQV421TSEDVNSTIK431AFFCPNDTYN441DMATLFFNSQ
451-500451ESAILQLFHQ461DGTFSPVTLA471LFFILYFLLA481CWTFGTSVPS491GLFVPSLLCG
501-550501AAFGRLVANV511LKSYIGLGHL521YSGTFALIGA531AAFLGGVVRM541TISLTVILIE
551-600551STNEITYGLP561IMVTLMVAKW571TGDLFNKGIY581DVHIGLRGVP591LLEWETDVEM
601-650601DKLRASDIME611PNLTYVYPHT621RIQSLVSILR631TTVHHAFPVV641TENRGNEKEF
651-700651MKGNQLISNN661IKFKKSSILT671RAGEQRKRGQ681SMKSYPSSEL691RNVCDEHVAS
701-750701EEPAEKEDLL711QQMLERRYTP721YPNLYPDQSP731SEDWTMEERF741RPLTFHGLVL
751-800751RSQLVTLLVR761GVCYSESQSS771ASQPRLSYAE781MAEDYPRYPD791IHDLDLTLLN
801-850801PRMIVDVTPY811MNPSPFTVSP821NTHVSQVFNL831FRTMGLRHLP841VVNAVGEIVG
851-873851IITRHNLTNE861FLQARLRQHY871QTL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
|
| 9 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.01
|
|
| 10 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.02
|
|
| 11 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 12 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.03
|
|
| 15 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.20
|
|
| 16 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.25
|
|
| 17 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.37
|
|
| 18 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.41
|
|
| 56 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.44
|
|
| 90 | - | - | - |
Deep-Palm: 0.38
|
|
| 123 | - | - | - |
Deep-Palm: 0.98
|
|
| 128 | - | - | - |
Deep-Palm: 0.98
|
|
| 167 | - | - | - |
Deep-Palm: 0.90
|
|
| 185 | - | - | - |
Deep-Palm: 0.98
|
|
| 286 | - | - | - |
Deep-Palm: 0.30
|
|
| 322 | - | - | - |
Deep-Palm: 0.54
|
|
| 329 | - | - | - |
Deep-Palm: 0.16
|
|
| 356 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.93
|
|
| 402 | - | - | - |
Deep-Palm: 0.60
|
|
| 434 | - | - | - |
Deep-Palm: 0.04
|
|
| 481 | - | - | - |
Deep-Palm: 0.71
|
|
| 499 | - | - | - |
Deep-Palm: 0.96
|
|
| 694 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.86
|
|
| 763 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
1
Brain
Specificity: 0.167
1/1 (100.0%)
1
NSC
Specificity: 0.167
1/1 (100.0%)
1
Testis
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.500
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.