Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2A8L5 | Ptprf | Receptor-type tyrosine-protein phosphatase F (EC … | Mus musculus (Mouse) | 1898 aa |
Protein Details: A2A8L5 (Ptprf)
Protein Information
| Accession | A2A8L5 |
|---|---|
| Protein Names | Receptor-type tyrosine-protein phosphatase F (EC 3.1.3.48) (Leukocyte common antigen related) (LAR) |
| Gene Symbol | Ptprf |
| Organism | Mus musculus (Mouse) |
| Length | 1898 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPEPAPGRR11MVPLVPALVM21LGLMAGAHGD31SKPVFVKVPE41DQTGLSGGVA
51-10051SFVCQATGEP61KPRITWMKKG71KKVSSQRFEV81IEFDDGAGSV91LRIQPLRVQR
101-150101DEAIYECTAT111NSLGEINTSA121KLSVLEEDQL131PSGFPTIDMG141PQLKVVEKGR
151-200151TATMLCAAGG161NPDPEISWFK171DFLPVDPAAS181NGRIKQLRSG191ALQIESSEES
201-250201DQGKYECVAT211NSAGTRYSAP221ANLYVRVRRV231APRFSIPPSS241QEVMPGGSVN
251-300251LTCVAVGAPM261PYVKWMMGAE271ELTKEDEMPV281GRNVLELSNV291MRSANYTCVA
301-350301ISSLGMIEAT311AQVTVKALPK321PPIDLVVTET331TATSVTLTWD341SGNTEPVSFY
351-400351GIQYRAAGTD361GPFQEVDGVA371STRYSIGGLS381PFSEYAFRVL391AVNSIGRGPP
401-450401SEAVRARTGE411QAPSSPPRRV421QARMLSASTM431LVQWEPPEEP441NGLVRGYRVY
451-500451YTPDSRRPLS461AWHKHNTDAG471LLTTVGSLLP481GITYSLRVLA491FTAVGDGPPS
501-550501PTIQVKTQQG511VPAQPADFQA521NAESDTRIQL531SWLLPPQERI541VKYELVYWAA
551-600551EDEGQQHKVT561FDPTSSYTLE571DLKPDTLYHF581QLAARSDLGV591GVFTPTVEAR
601-650601TAQSTPSAPP611QKVTCVSTGS621TTVRVSWVPP631PADSRNGIIT641QYSVAYEAVD
651-700651GEDRKRHVVD661GISREHSSWD671LLGLEKWTEY681RVWVRAHTDV691GPGPESSPVL
701-750701VRTDEDVPSG711PPRKVEVEPL721NSTAVHVSWK731LPVPNKQHGQ741IRGYQVTYVR
751-800751LENGEPRGQP761IIQDVMLAEA771QETTISGLTP781ETTYSITVAA791YTTKGDGARS
801-850801KPKVVTTTGA811VPGRPTMMVS821TTAMHTALLQ831WHPPKELPGE841LLGYRLQYRR
851-900851ADEARPNTID861FGKDDQHFTV871TGLHKGATYV881FRLAAKNRAG891PGEEFEKEIT
901-950901TPEDVPSGFP911QNLRVTGLTT921STTELTWDPP931VLAERNGHIT941NYTVVYRDIN
951-1000951SQLELQNVTN961DTHLTLLGLK971PDTTYDIKVR981AHTSKGAGPL991SPSIQSRTMP
1001-10501001VEQVFAKNFR1011VAAAMKTSVL1021LSWEVPDSYK1031SAVPFKILYN1041GQSVEVDGHS
1051-11001051MRKLIADLQP1061NTEYSFVLMN1071RGSSAGGLQH1081LVSIRTAPDL1091LPQKPLPASA
1101-11501101FIEDGRFSLS1111MPQVQDPSLV1121RWFYIVVVPI1131DRVGGNLLAP1141RWNTPEELEL
1151-12001151DELLEAIEQG1161EEKQRRRRRQ1171AERLKPYVAA1181QVDVLPDTFT1191LGDKKSYRGF
1201-12501201YNRPLSPDLS1211YQCFVLASLK1221EPMDQKRYAS1231SPYSDEIVVQ1241VTPAQQQEEP
1251-13001251EMLWVTGPVL1261AVILIILIVI1271AILLFKRKRT1281HSPSSKDEQS1291IGLKDSLLAH
1301-13501301SSDPVEMRRL1311NYQTPGMRDH1321PPIPITDLAD1331NIERLKANDG1341LKFSQEYESI
1351-14001351DPGQQFTWEN1361SNSEVNKPKN1371RYANVIAYDH1381SRVLLTSIDG1391VPGSDYINAN
1401-14501401YIDGYRKQNA1411YIATQGPLPE1421TMGDFWRMVW1431EQRTATVVMM1441TRLEEKSRVK
1451-15001451CDQYWPVRGT1461ETYGLIQVTL1471VDTVELATYT1481MRTFALHKSG1491SSEKRELRQF
1501-15501501QFMAWPDHGV1511PEYPTPILAF1521LRRVKACNPL1531DAGPMVVHCS1541AGVGRTGCFI
1551-16001551VIDAMLERMK1561HEKTVDIYGH1571VTCMRSQRNY1581MVQTEDQYVF1591IHEALLEAAM
1601-16501601CGHTEVLARN1611LYAHIQKLGQ1621VPPGESVTAM1631ELEFKLLANS1641KAHTSRFVSA
1651-17001651NLPCNKFKNR1661LVNIMPYELT1671RVCLQPIRGV1681EGSDYINASF1691LDGYRQQKAY
1701-17501701IATQGPLAES1711TEDFWRMLWE1721HNSTIIVMLT1731KLREMGREKC1741HQYWPAERSA
1751-18001751RYQYFVVDPM1761AEYNMPQYIL1771REFKVTDARD1781GQSRTIRQFQ1791FTDWPEQGVP
1801-18501801KTGEGFIDFI1811GQVHKTKEQF1821GQDGPITVHC1831SAGVGRTGVF1841ITLSIVLERM
1851-18981851RYEGVVDMFQ1861TVKTLRTQRP1871AMVQTEDQYQ1881LCYRAALEYL1891GSFDHYAT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 54 | - | - | - |
Deep-Palm: 0.70
|
|
| 107 | - | - | - |
Deep-Palm: 0.63
|
|
| 156 | - | - | - |
Deep-Palm: 0.65
|
|
| 207 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.33
|
|
| 253 | - | - | - |
Deep-Palm: 0.60
|
|
| 298 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.84
|
| 615 | - | - | - |
Deep-Palm: 0.43
|
|
| 1213 | - | - | - |
Deep-Palm: 0.85
|
|
| 1451 | - | - | - |
Deep-Palm: 0.29
|
|
| 1527 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.74
|
|
| 1539 | - | - | - |
Deep-Palm: 0.45
|
|
| 1548 | - | - | - |
Deep-Palm: 0.20
|
|
| 1573 | - | - | - |
Deep-Palm: 0.04
|
|
| 1601 | - | - | - |
Deep-Palm: 0.58
|
|
| 1654 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.61
|
|
| 1673 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.67
|
|
| 1740 | - | - | - |
Deep-Palm: 0.17
|
|
| 1830 | - | - | - |
Deep-Palm: 0.48
|
|
| 1882 | - | - | - |
Deep-Palm: 0.71
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
7
Brain tissue (Mass)
Specificity: 0.875
7/56 (12.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.