Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2AKU9 | Atp5f1c | ATP synthase subunit gamma | Mus musculus (Mouse) | 297 aa |
Protein Details: A2AKU9 (Atp5f1c)
Protein Information
| Accession | A2AKU9 |
|---|---|
| Protein Names | ATP synthase subunit gamma |
| Gene Symbol | Atp5f1c |
| Organism | Mus musculus (Mouse) |
| Length | 297 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFSRASVVGL11SACAVQPQWI21QVRNMATLKD31ITRRLKSIKN41IQKITKSMKM
51-10051VAAAKYARAE61RELKPARVYG71TGSLALYEKA81DIKAPEDKKK91HLIIGVSSDR
101-150101GLCGAIHSSV111AKQMKNEVAA121LTAAGKEVMI131VGVGEKIKGI141LYRTHSDQFL
151-200151VSFKDVGRKP161PTFGDASVIA171LELLNSGYEF181DEGSIIFNQF191KSVISYKTEE
201-250201KPIFSLNTIA211TAETMSIYDD221IDADVLQNYQ231EYNLANLIYY241SLKESTTSEQ
251-297251SARMTAMDNA261SKNASDMIDK271LTLTFNRTRQ281AVITKELIEI291ISGAAAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
Deep-Palm: 0.68
|
|
| 103 | SWISSPALM DBPTM CYSMODDB | ATP synthase |
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
32
Brain tissue (Mass)
Specificity: 1.000
32/56 (57.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.