Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2AMH5 | Slc44a1 | Choline transporter-like protein | Mus musculus (Mouse) | 656 aa |
Protein Details: A2AMH5 (Slc44a1)
Protein Information
| Accession | A2AMH5 |
|---|---|
| Protein Names | Choline transporter-like protein |
| Gene Symbol | Slc44a1 |
| Organism | Mus musculus (Mouse) |
| Length | 656 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGCCSSASAA11QSSKREWKPL21EDRSCTDIPW31LLLFVLFCIG41MGFICGFSVA
51-10051TGAAARLVSG61YDSYGNICGQ71RNAKLEAIPN81SGLDHTHRKY91VFFLDPCNLD
101-150101LINRKIKSIA111LCVAACPRQE121LKTLSDVQKF131AEINGSALCS141YNIKPSEYTL
151-200151TSKSSGFCPK161LPVPASAPIP171FFHRCAPVNI181SCYAKFAEAL191ITFVSDNSVL
201-250201HRLISGVMTS211KEIILGLCLL221SLVLSMILMV231IIRYISRVLV241WILTVLVILG
251-300251SLGGTGVLWW261LYAKQRRSPK271EAVIPEQLQI281AEDNLRALLI291YAISATVFTV
301-350301ILFLIMLVMR311KRVALTIALF321HVAGKVFIHL331PLLVFQPFWT341FFALVLFWAY
351-400351WIMTLLFLGT361TGSAVQNEQG371FVEYKISGPL381QYMWWYHVVG391LIWISEFILA
401-450401CQQMTVAGAV411VTYYFTRDKR421NLPFTPILAS431VNRLIRYHLG441TVAKGSFIIT
451-500451LVKIPRMVLM461YIHSQLKGKE471NACARCMLKS481CICCLWCLEK491CLSYLNQNAY
501-550501TATAINSTNF511CTSAKDAFVI521LVENALRVAA531INTVGDFMLF541LGKVLIVCST
551-600551GLAGIMLLNY561QQDYTVWVLP571LIIVCLFAFL581VAHCFLSIYE591MVVDVLFLCF
601-650601AIDTKYNDGS611PGREFYMDKV621LMEFVENSRK631AMKEAGKGGA641ADARELKPMA
651-656651SGASSA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.02
|
|
| 4 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 25 | - | - | - |
Deep-Palm: 0.85
|
|
| 38 | - | - | - |
Deep-Palm: 0.54
|
|
| 45 | Choline transporter-like | - | - |
Deep-Palm: 0.43
|
|
| 68 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
| 97 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.90
Deep-Palm: 0.74
|
| 112 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.96
Deep-Palm: 0.94
|
|
| 116 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.97
|
| 139 | - | - | - |
Deep-Palm: 0.79
|
|
| 158 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.88
|
|
| 175 | - | - | - |
Deep-Palm: 0.71
|
|
| 182 | - | - | - |
Deep-Palm: 0.29
|
|
| 218 | - | - | - |
Deep-Palm: 0.97
|
|
| 401 | - | - | - |
Deep-Palm: 0.11
|
|
| 473 | - | - | - |
Deep-Palm: 0.59
|
|
| 476 | - | - | - |
Deep-Palm: 0.66
|
|
| 481 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.81
|
|
| 483 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.66
|
|
| 484 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.66
|
|
| 487 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.60
|
|
| 491 | - | - | - |
Deep-Palm: 0.55
|
|
| 511 | - | - | - |
Deep-Palm: 0.41
|
|
| 548 | - | - | - |
Deep-Palm: 0.55
|
|
| 575 | - | - | - |
Deep-Palm: 0.13
|
|
| 584 | - | - | - |
Deep-Palm: 0.19
|
|
| 599 | - | - | - |
Deep-Palm: 0.13
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 0.077
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
24
Brain tissue (Mass)
Specificity: 0.923
24/56 (42.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.