Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2APM1 | Cd44 | CD44 antigen (Extracellular matrix receptor … | Mus musculus (Mouse) | 657 aa |
Protein Details: A2APM1 (Cd44)
Protein Information
| Accession | A2APM1 |
|---|---|
| Protein Names | CD44 antigen (Extracellular matrix receptor III) (GP90 lymphocyte homing/adhesion receptor) (HUTCH-I) (Hermes antigen) (Hyaluronate receptor) (Phagocytic glycoprotein 1) (Phagocytic glycoprotein I) |
| Gene Symbol | Cd44 |
| Organism | Mus musculus (Mouse) |
| Length | 657 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDKFWWHTAW11GLCLLQLSLA21HPHQQIDLNV31TCRYAGVFHV41EKNGRYSISR
51-10051TEAADLCQAF61NSTLPTMDQM71KLALSKGFET81CRYGFIEGNV91VIPRIHPNAI
101-150101CAANHTGVYI111LVTSNTSHYD121TYCFNASAPP131EEDCTSVTDL141PNSFDGPVTI
151-200151TIVNRDGTRY161SKKGEYRTHQ171EDIDASNIID181DDVSSGSTIE191KSTPESYILH
201-250201TYLPTEQPTG211DQDDSFFIRS221TLATIASTPR231VSARTEDNQD241WTQWKPNHSN
251-300251PEVLLQTTTR261MADIDRISTS271AHGENWTPEP281QPPFNNHEYQ291DEEETPHATS
301-350301TTPNSTAEAA311ATQQETWFQN321GWQGKNPPTP331SEDSHVTEGT341TASAHNNHPS
351-400351QRITTQSQED361VSWTDFFDPI371SHPMGQGHQT381ESKDTDSSHS391TTLQPTAAPN
401-450401THLVEDLNRT411GPLSVTTPQS421HSQNFSTLHG431EPEEDENHPT441TSILPSSTKS
451-500451GAKDARRGGS461LPTDTTTSVE471GYTFQYPDTM481ENGTLFPVTP491AKTEVFGETE
501-550501VTLATDSNVN511VDGSLPGDRD521SSKDSRGSSR531TVTHGSELAG541HSSANQDSGV
551-600551TTTSGPMRRP561QIPEWLIILA571SLLALALILA581VCIAVNSRRR591CGQKKKLVIN
601-650601GGNGTVEDRK611PSELNGEASK621SQEMVHLVNK631EPSETPDQCM641TADETRNLQS
651-657651VDMKIGV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
Deep-Palm: 0.04
|
|
| 32 | Link domain CD44 antigen-like C-type lectin fold | - | - |
Deep-Palm: 0.31
|
|
| 57 | - | - | - |
Deep-Palm: 0.73
|
|
| 81 | - | - | - |
Deep-Palm: 0.79
|
|
| 101 | - | - | - |
Deep-Palm: 0.29
|
|
| 123 | - | - | - |
Deep-Palm: 0.04
|
|
| 134 | - | - | - |
Deep-Palm: 0.12
|
|
| 582 | - | - | - |
Deep-Palm: 0.98
|
|
| 591 | - | - | - |
Deep-Palm: 0.97
|
|
| 639 | - | - | - |
Deep-Palm: 0.21
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver tissue (Mass)
Specificity: 0.667
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.