Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2AT37 | Upf2 | Regulator of nonsense transcripts 2 … | Mus musculus (Mouse) | 1269 aa |
Protein Details: A2AT37 (Upf2)
Protein Information
| Accession | A2AT37 |
|---|---|
| Protein Names | Regulator of nonsense transcripts 2 (Up-frameshift suppressor 2 homolog) (Upf2) |
| Gene Symbol | Upf2 |
| Organism | Mus musculus (Mouse) |
| Length | 1269 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPAERKKSAS11MEEKESLLNN21KEKDCSERRP31VSSKEKPRDD41LKVTAKKEVS
51-10051KVPEDKKKRL61EEDKRKKEDK71ERKKKEEEKV81KAEEELKKKE91EEEKKKQEEE
101-150101ERKKQEEQAK111RQQEEAAAQL121KEKEESLQLH131QEAWERHQLR141KELRSKNQNA
151-200151PDNRPEENFF161SRLDSSLKKN171TAFVKKLKTI181TEQQRDSLSH191DFNGLNLSKY
201-250201IAEAVASIVE211AKLKLSDVNC221AAHLCSLFHQ231RYSDFAPSLL241QVWKKHFEAR
251-300251KEEKTPNITK261LRTDLRFIAE271LTIVGIFTDK281EGLSLIYEQL291KSIINADRES
301-350301HTHVSVVISF311CRHCGDDIAG321LVPRKVKSAA331EKFNLSFPPS341EIISPEKQQP
351-400351FQNLLKEYFT361SLTKHLKRDH371RELQNTERQN381RRILHSKGEL391SEDRHKQYEE
401-450401FAMSYQKLLA411NSQSLADLLD421ENMPDLPQDK431PTPEEHGPGI441DIFTPGKPGE
451-500451YDLEGGIWED461EDARNFYENL471IDLKAFVPAI481LFKDNEKSQN491KDSNKDDSKE
501-550501AKEPKDNKEA511SSPDDLELEL521ENLEINDDTL531ELEGADEAED541LTKKLLDEQE
551-600551QEDEEASTGS561HLKLIVDAFL571QQLPNCVNRD581LIDKAAMDFC591MNMNTKANRK
601-650601KLVRALFIVP611RQRLDLLPFY621ARLVATLHPC631MSDVAEDLCS641MLRGDFRFHV
651-700651RKKDQINIET661KNKTVRFIGE671LTKFKMFTKN681DTLHCLKMLL691SDFSHHHIEM
701-750701ACTLLETCGR711FLFRSPESHL721RTSVLLEQMM731RKKQAMHLDA741RYVTMVENAY
751-800751YYCNPPPAEK761TVRKKRPPLQ771EYVRKLLYKD781LSKVTTEKVL791RQMRKLPWQD
801-850801QEVKDYVICC811MINIWNVKYN821SIHCVANLLA831GLVLYQEDVG841IHVVDGVLED
851-900851IRLGMEVNQP861KFNQRRISSA871KFLGELYNYR881MVESAVIFRT891LYSFTSFGVN
901-950901PDGSPSSLDP911PEHLFRIRLV921CTILDTCGQY931FDRGSSKRKL941DCFLVYFQRY
951-1000951VWWKKSLEVW961TKDHPFPIDI971DYMISDTLEL981LRPKIKLCNS991LEESIRQVQD
1001-10501001LEREFLIKLG1011LVNDKESKDS1021MTEGENLEED1031EEEEEGGAET1041EEQSGNESEV
1051-11001051NEPEEEEGSE1061EEEEGEEEEE1071ENTDYLTDSN1081KENETDEENA1091EVMIKGGGLK
1101-11501101HVPCVEDEDF1111IQALDKMMLE1121NLQQRSGESV1131KVHQLDVAIP1141LHLKSQLRKG
1151-12001151PPLGGGEGET1161ESADTMPFVM1171LTRKGNKQQF1181KILNVPMSSQ1191LAANHWNQQQ
1201-12501201AEQEERMRMK1211KLTLDINERQ1221EQEDYQEMLQ1231SLAQRPAPAN1241TNRERRPRYQ
1251-12691251HPKGAPNADL1261IFKTGGRRR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 25 | - | - | - |
Deep-Palm: 0.92
|
|
| 220 | - | - | - |
Deep-Palm: 0.89
|
|
| 225 | - | - | - |
Deep-Palm: 0.90
|
|
| 311 | - | - | - |
Deep-Palm: 0.32
|
|
| 314 | - | - | - |
Deep-Palm: 0.52
|
|
| 576 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.39
|
|
| 590 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.50
|
|
| 630 | - | - | - |
Deep-Palm: 0.93
|
|
| 639 | - | - | - |
Deep-Palm: 0.66
|
|
| 685 | - | - | - |
Deep-Palm: 0.09
|
|
| 702 | - | - | - |
Deep-Palm: 0.34
|
|
| 708 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.38
|
|
| 753 | - | - | - |
Deep-Palm: 0.34
|
|
| 809 | - | - | - |
Deep-Palm: 0.02
|
|
| 810 | - | - | - |
Deep-Palm: 0.02
|
|
| 824 | - | - | - |
Deep-Palm: 0.09
|
|
| 921 | - | - | - |
Deep-Palm: 0.79
|
|
| 927 | SWISSPALM DBPTM CYSMODDB | MIF4G domain |
Forebrain
(28680068)
| - |
GPS-Palm: 0.86
Deep-Palm: 0.75
|
| 942 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.58
|
|
| 988 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 1104 | - | - | - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.