Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2CG35 | Rab12 | Ras-related protein Rab-12 (EC 3.6.5.2) | Mus musculus (Mouse) | 291 aa |
Protein Details: A2CG35 (Rab12)
Protein Information
| Accession | A2CG35 |
|---|---|
| Protein Names | Ras-related protein Rab-12 (EC 3.6.5.2) |
| Gene Symbol | Rab12 |
| Organism | Mus musculus (Mouse) |
| Length | 291 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLLPLLRRSC11FPSSTPGGGG21GGGSAERVEG31ARGPGARGRR41PEREPYACMD
51-10051PSAALHRRPA61GGSLGAVSPA71LSGGQARRRK81QPPRPADFKL91QVIIIGSRGV
101-150101GKTSLMERFT111DDTFCEACKS121TVGVDFKIKT131VELRGKKIRL141QIWDTAGQER
151-200151FNSITSAYYR161SAKGIILVYD171ITKKETFDDL181PKWMKMIDKY191ASEDAELLLV
201-250201GNKLDCETDR211EISRQQGEKF221AQQITGMRFC231EASAKDNFNV241DEIFLKLVDD
251-291251ILKKMPLDVL261RNELSNSILS271LQPEPEIPPE281LPPPRPHVRC291C
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 10 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.82
|
| 48 | - | - | - |
Deep-Palm: 0.94
|
|
| 115 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 118 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.54
|
|
| 206 | - | - | - |
Deep-Palm: 0.98
|
|
| 230 | - | - | - |
Deep-Palm: 0.92
|
|
| 290 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.02
|
|
| 291 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.222
2/2 (100.0%)
1
Brain
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.667
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.