Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A2RT62 | Fbxl16 | F-box/LRR-repeat protein 16 (F-box and … | Mus musculus (Mouse) | 479 aa |
Protein Details: A2RT62 (Fbxl16)
Protein Information
| Accession | A2RT62 |
|---|---|
| Protein Names | F-box/LRR-repeat protein 16 (F-box and leucine-rich repeat protein 16) |
| Gene Symbol | Fbxl16 |
| Organism | Mus musculus (Mouse) |
| Length | 479 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSPGIDGDP11KPPCLPRNGL21VKLPGQPNGL31GAASITKGTP41AAKNRPCQPP
51-10051PPPTLPPPSL61ATPLSRVALA71GGPCPPASGP81ASGPVSGPPV91ERPPLATDEK
101-150101ILNGLFWYFS111ACEKCILAQV121CKAWRRVLYQ131PKFWAGLTPV141LHAKELYNVL
151-200151PGGEKEFVNL161QGFAARGFEG171FCLVGVSDLD181ICEFIDNYSL191SKKGVKAMSL
201-250201KRSTITDAGL211EVMLEQMQGV221VRLELSGCND231FTEAGLWSSL241SARITSLSVS
251-300251DCINVADDAI261AAISQLLPNL271AELSLQAYHV281TDTALAYFTA291RQGHSTHTLR
301-350301LLSCWEITNH311GVVNVVHSLP321NLTSLSLSGC331SKVTDDGVEL341VAENLRKLRS
351-400351LDLSWCPRIT361DMALEYVACD371LHRLEELVLD381RCVRITDTGL391SYLSTMSSLR
401-450401SLYLRWCCQV411QDFGLKHLLA421MRNLRLLSLA431GCPLLTTTGL441SGLVQLQELE
451-479451ELELTNCPGA461TPELFKYFSQ471HLPRCLVIE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.88
|
|
| 47 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.91
|
| 74 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 112 | - | - | - |
Deep-Palm: 0.25
|
|
| 115 | - | - | - |
Deep-Palm: 0.24
|
|
| 121 | - | - | - |
Deep-Palm: 0.18
|
|
| 172 | - | - | - |
Deep-Palm: 0.82
|
|
| 182 | - | - | - |
Deep-Palm: 0.86
|
|
| 228 | - | - | - |
Deep-Palm: 0.84
|
|
| 252 | - | - | - |
Deep-Palm: 0.70
|
|
| 304 | - | - | - |
Deep-Palm: 0.66
|
|
| 330 | - | - | - |
Deep-Palm: 0.93
|
|
| 356 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.91
|
|
| 369 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.79
|
|
| 382 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 407 | - | - | - |
Deep-Palm: 0.81
|
|
| 408 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.74
|
|
| 432 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
|
| 457 | - | - | - |
Deep-Palm: 0.96
|
|
| 475 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Brain
Specificity: 0.143
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.857
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.