Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| A6NNZ2 | TUBB8B | Tubulin beta 8B | Homo sapiens (Human) | 444 aa |
Protein Details: A6NNZ2 (TUBB8B)
Protein Information
| Accession | A6NNZ2 |
|---|---|
| Protein Names | Tubulin beta 8B |
| Gene Symbol | TUBB8B |
| Organism | Homo sapiens (Human) |
| Length | 444 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTM |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MREIVLTQTG11QCGNQIGAKF21WEVISDEHAI31DSAGTYHGDS41HLQLERINVH
51-10051HHEASGGRYV61PRAVLVDLEP71GTMDSVHSGP81FGQVFRPDNF91ISGQCGAGNN
101-150101WAKGRYTEGA111ELTESVMDVV121RKEAESCDCL131QGFQLTHSLG141GGTGSGMGTL
151-200151LISKIREEYP161DRIINTFSIL171PSPKVSDTVV181EPYNATLSVH191QLIENADETF
201-250201CIDNEALYDI211CSRTLKLPTP221TYGDLNHLVS231ATMSGVTTCL241RFPGQLNADL
251-300251RKLAVNMVPF261PRLHFFMPGF271APLTSRGSQQ281YRALTVAELT291QQMFDAKNMM
301-350301AACDPRHGCY311LTVAAIFRGR321MPMREVDEQM331FNIQDKNSSY341FADWFPDNVK
351-400351TAVCDIPPRG361LKMSATFIGN371NAAIQELFTC381VSEQFTAMFR391RKAFLHWYTG
401-444401EGMDEMEFTE411AESNMNDLVS421EYQQYQDATA431EEEEDEEYAE441EEVA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 12 | Tubulin/FtsZ, GTPase domain superfamily OS01G0282866 PROTEIN | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.05
|
|
| 95 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.69
|
|
| 127 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.76
|
|
| 129 | - | - | - |
Deep-Palm: 0.83
|
|
| 201 | - | - | - |
Deep-Palm: 0.42
|
|
| 211 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.71
|
|
| 239 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 303 | SWISSPALM DBPTM CYSMODDB | Tubulin C-terminal domain | - |
Unknown
(32651440)
cerebral cortex
(36430497)
|
GPS-Palm: 0.84
Deep-Palm: 0.16
|
| 309 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.43
|
|
| 354 | SWISSPALM DBPTM CYSMODDB | Tubulin C-terminal domain | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.91
Deep-Palm: 0.70
|
| 380 | - | - | - |
Deep-Palm: 0.47
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
cerebral cortex
Specificity: 0.667
4/4 (100.0%)
1
LNCaP
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP cells (Mass)
Specificity: 0.167
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.