Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B0YIW6 | ARCN1; hCG_40220 | Coatomer subunit delta | Homo sapiens (Human) | 552 aa |
Protein Details: B0YIW6 (ARCN1)
Protein Information
| Accession | B0YIW6 |
|---|---|
| Protein Names | Coatomer subunit delta |
| Gene Symbol | ARCN1; hCG_40220 |
| Organism | Homo sapiens (Human) |
| Length | 552 aa |
| Isoforms | No isoforms |
| Related PMIDs | 22496122 31251020 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.875
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
7
LNCaP cells
Specificity: 0.875
7/46 (15.2%)
1
Endothelial cells
Specificity: 0.125
1/2 (50.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAECNLVAIL11ISSIDNPLDK21NLDNGGNSCL31DFRPLNSFSQ41PQVLLAAAVC
51-10051TKAGKAIVSR61QFVEMTRTRI71EGLLAAFPKL81MNTGKQHTFV91ETESVRYVYQ
101-150101PMEKLYMVLI111TTKNSNILED121LETLRLFSRV131IPEYCRALEE141NEISEHCFDL
151-200151IFAFDEIVAL161GYRENVNLAQ171IRTFTEMDSH181EEKVFRAVRE191TQEREAKAEM
201-250201RRKAKELQQA211RRDAERQGKK221APGFGGFGSS231AVSGGSTAAM241ITETIIETDK
251-300251PKVAPAPARP261SGPSKALKLG271AKGKEVDNFV281DKLKSEGETI291MSSSMGKRTS
301-350301EATKMHAPPI311NMESVHMKIE321EKITLTCGRD331GGLQNMELHG341MIMLRISDDK
351-400351YGRIRLHVEN361EDKKGVQLQT371HPNVDKKLFT381AESLIGLKNP391EKSFPVNSDV
401-450401GVLKWRLQTT411EESFIPLTIN421CWPSESGNGC431DVNIEYELQE441DNLELNDVVI
451-500451TIPLPSGVGA461PVIGEIDGEY471RHDSRRNTLE481WCLPVIDAKN491KSGSLEFSIA
501-550501GQPNDFFPVQ511VSFVSKKNYC521NIQVTKVTQV531DGNSPVRFST541ETTFLVDKYE
551-552551IL
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 4 | Prediction (High) | - | - |
| 50 | CYSMODDB SWISSPALM DBPTM Prediction (High) | - | - |
| 135 | Prediction (Medium) | - | - |
| 327 | Prediction (High) | - | - |
| 482 | Prediction (Low) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 153 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 160 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 161 | R → C | 0.002294 | SNP | Missense Mutation | OV |
| 314 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 381 | W → C | 0.002020 | SNP | Missense Mutation | PRAD |