Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B1AR13 | Cisd3 | CDGSH iron-sulfur domain-containing protein 3, … | Mus musculus (Mouse) | 137 aa |
Protein Details: B1AR13 (Cisd3)
Protein Information
| Accession | B1AR13 |
|---|---|
| Protein Names | CDGSH iron-sulfur domain-containing protein 3, mitochondrial (Melanoma nuclear protein 13) |
| Gene Symbol | Cisd3 |
| Organism | Mus musculus (Mouse) |
| Length | 137 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGFRRLSFPT11DFIFLFPNHI21CLPALSKPYQ31RREISSWLAR41WFPKDPAKPV
51-10051VAQKTPIRLE61LVAGKTYRWC71VCGRSKNQPF81CDGSHFFQRT91GLSPLKFKAQ
101-137101ETRTVALCTC111KATQRPPYCD121GTHKSEQVQK131AEVGSPL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 21 | - | - | - |
Deep-Palm: 0.78
|
|
| 70 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.72
|
|
| 72 | - | - | - |
Deep-Palm: 0.52
|
|
| 81 | SWISSPALM DBPTM CYSMODDB | Iron-binding zinc finger CDGSH type |
Brain
(31311849)
brain
(39008777)
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.53
|
| 108 | - |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
|
| 110 | - |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.88
|
|
| 119 | SWISSPALM DBPTM CYSMODDB | Iron-binding zinc finger CDGSH type |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.125
5/5 (100.0%)
3
Brain
Specificity: 0.075
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
32
Brain tissue (Mass)
Specificity: 0.800
32/56 (57.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.