Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B1AS29 | Grik3 | Glutamate receptor ionotropic, kainate 3 … | Mus musculus (Mouse) | 919 aa |
Protein Details: B1AS29 (Grik3)
Protein Information
| Accession | B1AS29 |
|---|---|
| Protein Names | Glutamate receptor ionotropic, kainate 3 (GluK3) (Glutamate receptor 7) (GluR-7) (GluR7) |
| Gene Symbol | Grik3 |
| Organism | Mus musculus (Mouse) |
| Length | 919 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTAPWRRLRS11LVWEYWAGFL21VCAFWIPDSR31GMPHVIRIGG41IFEYADGPNA
51-10051QVMNAEEHAF61RFSANIINRN71RTLLPNTTLT81YDIQRIHFHD91SFEATKKACD
101-150101QLALGVVAIF111GPSQGSCTNA121VQSICNALEV131PHIQLRWKHH141PLDNKDTFYV
151-200151NLYPDYASLS161HAILDLVQSL171KWRSATVVYD181DSTGLIRLQE191LIMAPSRYNI
201-250201RLKIRQLPID211SDDSRPLLKE221MKRGREFRII231FDCSHTMAAQ241ILKQAMAMGM
251-300251MTEYYHFIFT261TLDLYALDLE271PYRYSGVNLT281GFRILNVDNP291HVSAIVEKWA
301-350301MERLQAAPRA311ESGLLDGVMM321TDAALLYDAV331HIVSVCYQRA341PQMTVNSLQC
351-400351HRHKAWRFGG361RFMNFIKEAQ371WEGLTGRIVF381NKTSGLRTDF391DLDIISLKED
401-450401GLEKVGVWSP411ADGLNITEVA421KGRGPNVTDS431LTNRSLIVTT441VLEEPFVMFR
451-500451KSDRTLYGND461RFEGYCIDLL471KELAHILGFS481YEIRLVEDGK491YGAQDDKGQW
501-550501NGMVKELIDH511KADLAVAPLT521ITHVREKAID531FSKPFMTLGV541SILYRKPNGT
551-600551NPSVFSFLNP561LSPDIWMYVL571LAYLGVSCVL581FVIARFSPYE591WYDAHPCNPG
601-650601SEVVENNFTL611LNSFWFGMGS621LMQQGSELMP631KALSTRIIGG641IWWFFTLIII
651-700651SSYTANLAAF661LTVERMESPI671DSADDLAKQT681KIEYGAVKDG691ATMTFFKKSK
701-750701ISTFEKMWAF711MSSKPSALVK721NNEEGIQRTL731TADYALLMES741TTIEYITQRN
751-800751CNLTQIGGLI761DSKGYGIGTP771MGSPYRDKIT781IAILQLQEED791KLHIMKEKWW
801-850801RGSGCPEEEN811KEASALGIQK821IGGIFIVLAA831GLVLSVLVAV841GEFIYKLRKT
851-900851AEREQRSFCS861TVADEIRFSL871TCQRRLKHKP881QPPMMVKTDA891VINMHTFNDR
901-919901RLPGKDSMSC911STSLAPVFP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | - | - | - |
Deep-Palm: 0.45
|
|
| 99 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.44
|
|
| 117 | - | - | - |
Deep-Palm: 0.70
|
|
| 125 | - | - | - |
Deep-Palm: 0.14
|
|
| 233 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.66
|
|
| 336 | - | - | - |
Deep-Palm: 0.59
|
|
| 350 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.79
Deep-Palm: 0.33
|
|
| 466 | - | - | - |
Deep-Palm: 0.91
|
|
| 578 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.08
|
|
| 597 | - | - | - |
Deep-Palm: 0.14
|
|
| 751 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.73
|
|
| 805 | - | - | - |
Deep-Palm: 0.84
|
|
| 859 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.86
Deep-Palm: 0.93
|
| 872 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.68
|
| 910 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.100
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.900
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.