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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
B1ASE2 Atp5pd ATP synthase peripheral stalk subunit … Mus musculus (Mouse) 138 aa

Protein Details: B1ASE2 (Atp5pd)

Protein Information
AccessionB1ASE2
Protein NamesATP synthase peripheral stalk subunit d
Gene SymbolAtp5pd
OrganismMus musculus (Mouse)
Length138 aa
IsoformsNo isoforms
Related PMIDs 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass)
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGRKLALKT11IDWVSFVEVM21PQNQKAIGNA31LKSWNETFHA41RLASLSEKPP
51-10051AIDWAYYRAN61VAKPGLVDDF71EKKYNALKIP81VPEDKYTALV91DQEEKEDVKS
101-138101CAEFVSGSQL111RIQEYEKQLE121KMRNIIPFDQ131MTIDDLNE
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
101 SWISSPALM DBPTM CYSMODDB ATP synthase D chain mitochondrial (ATP5H)
liver (26165157)
Brain (35358180)
Brain (31311849)
Deep-Palm: 0.90
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
33
Brain tissue (Mass)
Specificity: 1.000
33/56 (58.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.