Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B1AWN6 | Scn2a; Scn2a1 | Sodium channel protein type 2 … | Mus musculus (Mouse) | 2006 aa |
Protein Details: B1AWN6 (Scn2a)
Protein Information
| Accession | B1AWN6 |
|---|---|
| Protein Names | Sodium channel protein type 2 subunit alpha (Voltage-gated sodium channel subunit alpha Nav1.2) |
| Gene Symbol | Scn2a; Scn2a1 |
| Organism | Mus musculus (Mouse) |
| Length | 2006 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28680068 35358180 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
3
Brain tissue
Specificity: 1.000
3/12 (25.0%)
0
Liver tissue
Specificity: 0.000
0/19 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAQSVLVPPG11PDSFRFFTRE21SLAAIEQRIA31EEKAKRPKQE41RKDEDDENGP
51-10051KPNSDLEAGK61SLPFIYGDIP71PEMVSEPLED81LDPYYINKKT91FIVLNKGKAI
101-150101SRFSATSALY111ILTPFNPIRK121LAIKILVHSL131FNVLIMCTIL141TNCVFMTMSN
151-200151PPDWTKNVEY161TFTGIYTFES171LIKILARGFC181LEDFTFLRDP191WNWLDFTVIT
201-250201FAYVTEFVNL211GNVSALRTFR221VLRALKTISV231IPGLKTIVGA241LIQSVKKLSD
251-300251VMILTVFCLS261VFALIGLQLF271MGNLRNKCLQ281WPPDNSTFEI291NITSFFNNSL
301-350301DWNGTAFNRT311MNMFNWDEYI321EDKSHFYFLE331GQNDALLCGN341SSDAGQCPEG
351-400351YICVKAGRNP361NYGYTSFDTF371SWAFLSLFRL381MTQDFWENLY391QLTLRAAGKT
401-450401YMIFFVLVIF411LGSFYLINLI421LAVVAMAYEE431QNQATLEEAE441QKEAEFQQML
451-500451EQLKKQQEEA461QAAAAAASAE471SRDFSGAGGI481GVFSESSSVA491SKLSSKSEKE
501-550501LKNRRKKKKQ511KEQAGEEEKE521DAVRKSASED531SIRKKGFRFS541LEGSRLTYEK
551-600551RFSSPHQSLL561SIRGSLFSPR571RNSRASLFSF581KGRVKDIGSE591NDFADDEHST
601-650601FEDNDSRRDS611LFVPHRHGER621RPSNVSQASR631ASRGIPTLPM641NGKMHSAVDC
651-700651NGVVSLVGGP661SALTSPVGQL671LPEGTTTETE681IRKRRSSSYH691VSMDLLEDPT
701-750701SRQRAMSMAS711ILTNTMEELE721ESRQKCPPCW731YKFANMCLIW741DCCKPWLKVK
751-800751HVVNLVVMDP761FVDLAITICI771VLNTLFMAME781HYPMTEQFSS791VLSVGNLVFT
801-850801GIFTAEMFLK811IIAMDPYYYF821QEGWNIFDGF831IVSLSLMELG841LANVEGLSVL
851-900851RSFRLLRVFK861LAKSWPTLNM871LIKIIGNSVG881ALGNLTLVLA891IIVFIFAVVG
901-950901MQLFGKSYKE911CVCKISNDCE921LPRWHMHDFF931HSFLIVFRVL941CGEWIETMWD
951-1000951CMEVAGQTMC961LTVFMMVMVI971GNLVVLNLFL981ALLLSSFSSD991NLAATDDDNE
1001-10501001MNNLQIAVGR1011MQKGIDFVKR1021KIREFIQKAF1031VRKQKALDEI1041KPLEDLNNKK
1051-11001051DSCISNHTTI1061EIGKDLNYLK1071DGNGTTSGIG1081SSVEKYVVDE1091SDYMSFINNP
1101-11501101SLTVTVPIAV1111GESDFENLNT1121EEFSSESDME1131ESKEKLNATS1141SSEGSTVDIG
1151-12001151APAEGEQPEA1161EPEESLEPEA1171CFTEDCVRKF1181KCCQISIEEG1191KGKLWWNLRK
1201-12501201TCYKIVEHNW1211FETFIVFMIL1221LSSGALAFED1231IYIEQRKTIK1241TMLEYADKVF
1251-13001251TYIFILEMLL1261KWVAYGFQMY1271FTNAWCWLDF1281LIVDVSLVSL1291TANALGYSEL
1301-13501301GAIKSLRTLR1311ALRPLRALSR1321FEGMRVVVNA1331LLGAIPSIMN1341VLLVCLIFWL
1351-14001351IFSIMGVNLF1361AGKFYHCINY1371TTGEMFDVSV1381VNNYSECQAL1391IESNQTARWK
1401-14501401NVKVNFDNVG1411LGYLSLLQVA1421TFKGWMDIMY1431AAVDSRNVEL1441QPKYEDNLYM
1451-15001451YLYFVIFIIF1461GSFFTLNLFI1471GVIIDNFNQQ1481KKKFGGQDIF1491MTEEQKKYYN
1501-15501501AMKKLGSKKP1511QKPIPRPANK1521FQGMVFDFVT1531KQVFDISIMI1541LICLNMVTMM
1551-16001551VETDDQSQEM1561TNILYWINLV1571FIVLFTGECV1581LKLISLRHYY1591FTIGWNIFDF
1601-16501601VVVILSIVGM1611FLAELIEKYF1621VSPTLFRVIR1631LARIGRILRL1641IKGAKGIRTL
1651-17001651LFALMMSLPA1661LFNIGLLLFL1671VMFIYAIFGM1681SNFAYVKREV1691GIDDMFNFET
1701-17501701FGNSMICLFQ1711ITTSAGWDGL1721LAPILNSGPP1731DCDPEKDHPG1741SSVKGDCGNP
1751-18001751SVGIFFFVSY1761IIISFLVVVN1771MYIAVILENF1781SVATEESAEP1791LSEDDFEMFY
1801-18501801EVWEKFDPDA1811TQFIEFCKLS1821DFAAALDPPL1831LIAKPNKVQL1841IAMDLPMVSG
1851-19001851DRIHCLDILF1861AFTKRVLGES1871GEMDALRIQM1881EERFMASNPS1891KVSYEPITTT
1901-19501901LKRKQEEVSA1911IVIQRAYRRY1921LLKQKVKKVS1931SIYKKDKGKE1941DEGTPIKEDI
1951-20001951ITDKLNENST1961PEKTDVTPST1971TSPPSYDSVT1981KPEKEKFEKD1991KSEKEDKGKD
2001-20062001IRESKK
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 180 | Prediction (Medium) | - | - |
| 650 | Prediction (Low) | - | - |
| 737 | Prediction (Low) | - | - |
| 742 | Prediction (Medium) | - | - |
| 743 | Prediction (Low) | - | - |
| 919 | Experimental | Ion transport protein | 39008777 |
| 941 | Prediction (Low) | - | - |
| 1053 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Low) | - | 28680068 |
| 1171 | Experimental Prediction (Low) | Sodium ion transport-associated | 28680068 |
| 1176 | Experimental Prediction (Low) | Sodium ion transport-associated | 28680068 |
| 1182 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Sodium ion transport-associated | 28680068 |
| 1183 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | Sodium ion transport-associated | 28680068 |
| 1579 | Prediction (Medium) | - | - |
| 1817 | Experimental Prediction (Low) | - | 35358180 |
| 1855 | Prediction (Low) | - | - |