Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B2CY77 | Rpsa | 40S ribosomal protein SA | Mus musculus (Mouse) | 295 aa |
Protein Details: B2CY77 (Rpsa)
Protein Information
| Accession | B2CY77 |
|---|---|
| Protein Names | 40S ribosomal protein SA |
| Gene Symbol | Rpsa |
| Organism | Mus musculus (Mouse) |
| Length | 295 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGALDVLQM11KEEDVLKFLA21AGTHLGGTNL31DFQMEQYIYK41RKSDGIYIIN
51-10051LKRTWEKLLL61AARAIVAIEN71PADVSVISSR81NTGQRAVLKF91AAATGATPIA
101-150101GRFTPGTFTN111QIQAAFREPR121LLVVTDPRAD131HQPLTEASYV141NLPTIALCNT
151-200151DSPLRYVDIA161IPCNNKGAHS171VGLMWWMLAR181EVLRMRGIIS191REHPWEVMPD
201-250201LYFYRDPEEI211EKEEQAAAEK221AVTKEEFQGE231WTAPAPEFTA241AQPEVADWSE
251-295251GVQVPSVPIQ261QFPTEDWSAQ271PATEDWSAAP281TAQATEWVGA291TTEWS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 148 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 163 | - | - | - |
Deep-Palm: 0.43
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 0.182
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.818
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.