Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B2RR83 | Ythdc2 | 3'-5' RNA helicase YTHDC2 (EC … | Mus musculus (Mouse) | 1445 aa |
Protein Details: B2RR83 (Ythdc2)
Protein Information
| Accession | B2RR83 |
|---|---|
| Protein Names | 3'-5' RNA helicase YTHDC2 (EC 3.6.4.13) (Keen to exit meiosis leaving testes under-populated protein) (Ketu) (YTH domain-containing protein C2) (mYTHDC2) |
| Gene Symbol | Ythdc2 |
| Organism | Mus musculus (Mouse) |
| Length | 1445 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
2
Testis
Specificity: 1.000
2/2 (100.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Liver tissue
Specificity: 0.000
0/19 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSRPSSVSPR11PPAPSGGGTG21GGGGGSGGGG31GGGGGGPASC41GPGGGGRAKG
51-10051LKDIRIDEEV61KIAVNIALER71FRYGDQREME81FPSSLTSTER91AFIHRLSQSL
101-150101GLVSKSKGKG111ANRYLTVKKK121DGSETAHAMM131TCNLTHNTKH141AVRSLIQRFP
151-200151VTNKERTELL161PKTERGNVFA171VEAENREMSK181TSGRLNNGIP191QVPVKRGESE
201-250201FDSFRQSLPV211FEKQEEIVKI221IKENKVVLIV231GETGSGKTTQ241IPQFLLDDCF
251-300251KNGIPCRIFC261TQPRRLAAIA271VAERVAAERR281ERIGQTIGYQ291IRLESRVSPK
301-350301TLLTFCTNGV311LLRTLMAGDS321TLSTVTHVIV331DEVHERDRFS341DFLLTKLRDL
351-400351LQKHPTLKLI361LSSAALDVNL371FIRYFGSCPV381IYIQGRPFEV391KEMFLEDILR
401-450401TTGYTNKEML411KYKKEKQREE421KQQTTLTEWY431SAQENTFKPE441SQRQRAVASV
451-500451SEEYDLLDDG461GDAVFSQLTE471KDVNCLEPWL481IKEMDACLSD491IWLHKDVDAF
501-550501AQVFHLILTE511NVSVDYRHSE521TSATALMVAA531GRGFTSQVEQ541LISMGANVHS
551-600551KASNGWMALD561WAKHFGQTEI571VDLLESYSAS581LEFGNLDESS591LVQTNGNDLS
601-650601AEDRELLKAY611HHSFDDEKVD621LDLIMHLLYN631ICHSCDAGAI641LIFLPGYDEI
651-700651VGLRDRILFD661DKRFADNTHR671YQVFMLHSNM681QTSDQKKVLK691NPPAGVRKII
701-750701LSTNIAETSI711TVNDVVFVID721SGKVKEKSFD731ALNFVTMLKM741VWISKASAIQ
751-800751RKGRAGRCRP761GICFRLFSRL771RFQNMLEFQT781PELLRMPLQE791LCLHTKLLAP
801-850801VNCTIADFLM811KAPEPPPALI821VRNAVQMLKT831IDAMDAWEDL841TELGYHLADL
851-900851PVEPHLGKMV861LCAVVLKCLD871PILTIACTLA881YRDPFVLPTQ891ASQKRAAMLC
901-950901RKRFTAGTFS911DHMALLRAFQ921AWQKARSDGW931ERAFCEKNFL941SQATMEIIIG
951-1000951MRTQLLGQLR961ASGFVRARGG971GDIRDVNTNS981ENWAVVKAAL991VAGMYPNLVH
1001-10501001VDRENVILTG1011PKEKKVRFHP1021TSVLSQPQYK1031KIPPANGQAA1041AIQALPTDWL
1051-11001051IYDEMTRAHR1061IANIRCCSAV1071TPVTVLVFCG1081PARLASNALQ1091EPSSFRADGI
1101-11501101PNDSSDSEME1111DRTTANLAAL1121KLDEWLNFKL1131EPEAASLLLQ1141LRQKWHSLFL
1151-12001151RRMRAPSKPW1161SQVDEATIRA1171IIAVLSTEEQ1181SAGLQQPSGI1191GQRPRPMSSE
1201-12501201ELPLASSWRS1211NNSRKSTADT1221EFADGSTTGE1231RVLMKSPSPA1241LHPPQKYKDR
1251-13001251GILHPKRSTD1261DRSDQSSVKS1271TDSSSYPSPC1281ASPSPPSSGK1291GSKSPSPRPN
1301-13501301MPIRYFIMKS1311SNLRNLEISQ1321QKGIWSTTPS1331NERKLNRAFW1341ESSMVYLVFS
1351-14001351VQGSGHFQGF1361SRMSSEIGRE1371KSQDWGSAGL1381GGVFKVEWIR1391KESLPFQFAH
1401-14451401HLLNPWNDNK1411KVQISRDGQE1421LEPQVGEQLL1431QLWERLPLGE1441KTTSD
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 40 | Prediction (Medium) | - | - |
| 249 | Prediction (Medium) | - | - |
| 256 | Prediction (Medium) | - | - |
| 260 | Prediction (High) | - | - |
| 306 | Prediction (High) | - | - |
| 378 | Prediction (Medium) | - | - |
| 758 | Prediction (Medium) | - | - |
| 763 | Prediction (High) | - | - |
| 792 | Prediction (Medium) | - | - |
| 862 | Prediction (Low) | - | - |
| 877 | Prediction (Low) | - | - |
| 900 | Prediction (Medium) | - | - |
| 1066 | Prediction (Low) | - | - |
| 1067 | Prediction (High) | - | - |
| 1079 | Prediction (Medium) | - | - |