Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B2RXS4 | Plxnb2 | Plexin-B2 | Mus musculus (Mouse) | 1842 aa |
Protein Details: B2RXS4 (Plxnb2)
Protein Information
| Accession | B2RXS4 |
|---|---|
| Protein Names | Plexin-B2 |
| Gene Symbol | Plxnb2 |
| Organism | Mus musculus (Mouse) |
| Length | 1842 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29575903 31772009 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALPLWALTF11LGLTGLGLSL21RSRKPESFRS31ETELNHLAVD41EVTGVVYVGA
51-10051VNALYQLSAD61LHVQQHVVTG71PFMDNKKCTP81PIEASQCHEA91VLTDNFNQLL
101-150101LLDPPGKRLV111ECGSLFKGIC121ALRAMSNISV131RLFYEDGSGE141KSFVASNDER
151-200151VATVGLVTST161RPDGERVLFV171GKGNGPHDNG181IIVSTRLLDR191AEGREAFEAY
201-250201SDHTTFKAGY211LSTNTQQFVA221AFEDDFYVFF231VFNHQDKHPA241KNRTLLARMC
251-300251KDDPSYYSYV261EMDLQCQDPS271DPQDSAFGTC281LAASVATSGA291GRALYAVFSR
301-350301DGRSTGGPGA311GLCVFPLDKV321REKIEANRNA331CYTGAREAGR341TIFYKPFHGE
351-400351IQCGGHLIGA361SESFPCGSEH371LPYPLGSRDG381LVATAVLHRG391GLNLTAVTVT
401-450401AENDHTVAFL411GTSDGRILKV421YLAPDGTSAE431YGSIPVDINK441KIKQDLALSG
451-500451NLSSLYAMTQ461DKVFRLPVQE471CLSYVTCAQC481RDSQDPYCGW491CVIEGRCTRK
501-550501SECSRAEETG511HWLWSREKSC521VAITDAFPQN531MSRRAQGEVR541LSVSPLPTLT
551-600551EDDELLCLFG561DSPPHPARVE571DDTVICNSPS581SIPSTPPGQD591HVDVSIQLLL
601-650601KSGSVFLTSH611QYPFYDCREA621MSLVENLPCI631SCASNRWTCQ641WDLQYYECRE
651-700651ASPNPEEGII661RAHMEDNCPQ671FLAPDPLVIP681MNHETEVTFQ691GKNLETVKVS
701-750701SLYVGSELLN711FEETVTMHES721DTFSFRTPKL731SHDGNETLPL741HLYVKSFGKN
751-800751IDSKLQVTLY761NCSFGRSDCS771LCLAADPAYR781CVWCRGQNRC791VYEALCSNVT
801-850801SECPPPVITR811IQPETGPLGG821GILVTIHGSN831LGVKADDVKK841ITVAGQNCAF
851-900851EPRGYSVSTR861IVCAIEASEM871PFTGGIEVDV881NGKLGHSPPH891VQFTYQQPQP
901-950901LSVEPRQGPQ911AGGTTLTING921THLDTGSKED931VRVTLNDVPC941EVTKFGAQLQ
951-1000951CVTGQQLAPG961QVTLEIYYGG971SRVPSPGISF981TYCENPMIRA991FEPLRSFVSG
1001-10501001GRSINVTGQG1011FSLIQKFAMV1021VIAEPLRSWR1031RRRREAGALE1041RVTVEGMEYV
1051-11001051FYNDTKVVFL1061SPAVPEEPEA1071YNLTVLIRMD1081GHCAPLRTEA1091GVFEYVADPT
1101-11501101FENFTGGVKK1111QVNKLIHARG1121TNLNKAMTLE1131EAEAFVGAER1141CIMKTLTETD
1151-12001151LYCEPPEVQP1161PPKRRQKRDT1171AHNLPEFIVK1181FGSREWVLGR1191VEYDTRASDV
1201-12501201PLSLILPLVM1211VPMVFIIVVS1221IYCYWRKSQQ1231AEREYEKIKS1241QLEGLEESVR
1251-13001251DRCKKEFTDL1261MIEMEDQTND1271VHEAGIPTLD1281YKTYTDRVFF1291LPSKDGDKDV
1301-13501301MITGKLDIPE1311SRRPIVEQAL1321YQFSNLLNSK1331SFLINFIHTL1341ENQREFSARA
1351-14001351KVYFASLLTV1361ALHGKLEYYT1371DIMRTLFLEL1381MEQYVVAKNP1391KLMLRRSETV
1401-14501401VERMLSNWMS1411ICLYQYLKDS1421AGEPLYKLFK1431AIKHQVEKGP1441VDAVQKKAKY
1451-15001451TLNDTGLLGD1461DVEYAPLTVS1471VIVQDEGIDA1481IPVKVLNCDT1491ISQVKEKIID
1501-15501501QVYRTQPCSC1511WPKPDSVVLE1521WRPGSTAQIL1531SDLDLTSQRE1541GRWKRINTLM
1551-16001551HYNVRDGATL1561ILSKVGVSQQ1571PEDSQQDLPG1581ERHALLEEEN1591RVWHLVRPTD
1601-16501601EVDEGKSKRG1611SMKEKERTKA1621ITEIYLTRLL1631SVKGTLQQFV1641DNFFQSVLAP
1651-17001651GHAVPPAVKY1661FFDFLDEQAE1671KHDIRDEDTI1681HIWKTNSLPL1691RFWVNILKNP
1701-17501701HFIFDVHVHE1711VVDASLSVIA1721QTFMDACTRT1731EHKLSRDSPS1741NKLLYAKEIS
1751-18001751TYKKMVEDYY1761KGIRQMVQVS1771DQDMNTHLAE1781ISRAHTDSLN1791TLVALHQLYQ
1801-18421801YTQKYYDEII1811NALEEDPAAQ1821KMQLAFRLQQ1831IAAALENKVT1841DL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 78 | - | - | - |
Deep-Palm: 0.14
|
|
| 87 | - | - | - |
Deep-Palm: 0.48
|
|
| 112 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.98
|
|
| 120 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.93
|
|
| 250 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.80
|
|
| 266 | - | - | - |
Deep-Palm: 0.07
|
|
| 280 | - | - | - |
Deep-Palm: 0.95
|
|
| 313 | Sema domain |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.92
Deep-Palm: 0.98
|
|
| 331 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.96
|
|
| 353 | - | - | - |
Deep-Palm: 0.42
|
|
| 366 | - | - | - |
Deep-Palm: 0.82
|
|
| 471 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.16
|
|
| 477 | - | - | - |
Deep-Palm: 0.03
|
|
| 480 | - | - | - |
Deep-Palm: 0.02
|
|
| 488 | - | - | - |
Deep-Palm: 0.04
|
|
| 491 | - | - | - |
Deep-Palm: 0.09
|
|
| 497 | - | - | - |
Deep-Palm: 0.07
|
|
| 503 | - | - | - |
Deep-Palm: 0.29
|
|
| 520 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.58
|
|
| 557 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 576 | - | - | - |
Deep-Palm: 0.28
|
|
| 617 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.18
|
| 629 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.05
|
|
| 632 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.06
|
|
| 639 | - | - | - |
Deep-Palm: 0.04
|
|
| 648 | - | - | - |
Deep-Palm: 0.08
|
|
| 668 | - | - | - |
Deep-Palm: 0.18
|
|
| 762 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.81
|
|
| 769 | - | - | - |
Deep-Palm: 0.08
|
|
| 772 | - | - | - |
Deep-Palm: 0.09
|
|
| 781 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.13
|
|
| 784 | - | - | - |
Deep-Palm: 0.12
|
|
| 790 | - | - | - |
Deep-Palm: 0.05
|
|
| 796 | - | - | - |
Deep-Palm: 0.08
|
|
| 803 | - | - | - |
Deep-Palm: 0.53
|
|
| 848 | - |
MLE
(39008777)
| - |
GPS-Palm: 0.79
Deep-Palm: 0.88
|
|
| 863 | - | - | - |
Deep-Palm: 0.78
|
|
| 940 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.82
|
|
| 951 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.54
|
|
| 983 | - | - | - |
Deep-Palm: 0.72
|
|
| 1083 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.82
|
|
| 1141 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.84
|
|
| 1153 | - | - | - |
Deep-Palm: 0.75
|
|
| 1223 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.74
|
|
| 1253 | - | - | - |
Deep-Palm: 0.94
|
|
| 1412 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.76
|
|
| 1488 | Plexin cytoplasmic RhoGTPase-binding domain |
MLE
(39008777)
| - |
GPS-Palm: 0.85
Deep-Palm: 0.77
|
|
| 1508 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.54
|
|
| 1510 | - | - | - |
Deep-Palm: 0.41
|
|
| 1727 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.70
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
4
Liver
Specificity: 0.167
4/4 (100.0%)
3
Raw 264.7
Specificity: 0.125
3/3 (100.0%)
2
Testis
Specificity: 0.083
2/2 (100.0%)
1
NSC
Specificity: 0.042
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
14
Brain tissue (Mass)
Specificity: 0.583
14/56 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.