Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| B3KX19 | N/A | 116 kDa U5 small nuclear … | Homo sapiens (Human) | 962 aa |
Protein Details: B3KX19
Protein Information
| Accession | B3KX19 |
|---|---|
| Protein Names | 116 kDa U5 small nuclear ribonucleoprotein component (U5 snRNP-specific protein, 116 kDa) |
| Gene Symbol | Not available |
| Organism | Homo sapiens (Human) |
| Length | 962 aa |
| Isoforms | No isoforms |
| Related PMIDs | 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDTDLYDEFG11NYIGPELDSD21EDDDELGRET31KDLDEMDDDD41DDDDVGDHDD
51-10051DHPGMEVVLH61EVYGPEVETI71VQEEDTQPLT81EPIIKPVKTK91KFTLMEQTLP
101-150101VTVYEMDFLA111DLMDNSELIR121NVTLCGHLHH131GKTCFVDCLI141EQTHPEIRKR
151-200151YDQDLCYTDI161LFTEQERGVG171IKSTPVTVVL181PDTKGKSYLF191NIMDTPGHVN
201-250201FSDEVTAGLR211ISDGVVLFID221AAEGVMLNTE231RLIKHAVQER241LAVTVCINKI
251-300251DRLILELKLP261PTDAYYKLRH271IVDEVNGLIS281MYSTDENLIL291SPLLGNVCFS
301-350301SSQYSICFTL311GSFAKIYADT321FGDINYQEFA331KRLWGDIYFN341PKTRKFTKKA
351-400351PTSSSQRSFV361EFILEPLYKI371LAQVVGDVDT381SLPRTLDELG391IHLTKEELKL
401-450401NIRPLLRLVC411KKFFGEFTGF421VDMCVQHIPS431PKVGAKPKIE441HTYTGGVDSD
451-500451LGEAMSDCDP461DGPLMCHTTK471MYSTDDGVQF481HAFGRVLSGT491IHAGQPVKVL
501-550501GENYTLEDEE511DSQICTVGRL521WISVARYHIE531VNRVPAGNWV541LIEGVDQPIV
551-600551KTATITEPRG561NEEAQIFRPL571KFNTTSVIKI581AVEPVNPSEL591PKMLDGLRKV
601-650601NKSYPSLTTK611VEESGEHVIL621GTGELYLDCV631MHDLRKMYSE641IDIKVADPVV
651-700651TFCETVVETS661SLKCFAETPN671KKNKITMIAE681PLEKGLAEDI691ENEVVQITWN
701-750701RKKLGEFFQT711KYDWDLLAAR721SIWAFGPDAT731GPNILVDDTL741PSEVDKALLG
751-800751SVKDSIVQGF761QWGTREGPLC771DELIRNVKFK781ILDAVVAQEP791LHRGGGQIIP
801-850801TARRVVYSAF811LMATPRLMEP821YYFVEVQAPA831DCVSAVYTVL841ARRRGHVTQD
851-900851APIPGSPLYT861IKAFIPAIDS871FGFETDLRTH881TQGQAFSLSV891FHHWQIVPGD
901-950901PLDKSIVIRP911LEPQPAPHLA921REFMIKTRRR931KGLSEDVSIS941KFFDDPMLLE
951-962951LAKQDVVLNY961PM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 125 | - | - | - |
Deep-Palm: 0.62
|
|
| 134 | - | - | - |
Deep-Palm: 0.47
|
|
| 138 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.35
|
|
| 156 | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.71
Deep-Palm: 0.54
|
|
| 246 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.97
|
|
| 298 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.92
|
|
| 307 | - | - | - |
Deep-Palm: 0.55
|
|
| 410 | - | - | - |
Deep-Palm: 0.97
|
|
| 424 | - | - | - |
Deep-Palm: 0.56
|
|
| 458 | - | - | - |
Deep-Palm: 0.12
|
|
| 466 | - | - | - |
Deep-Palm: 0.04
|
|
| 515 | - | - | - |
Deep-Palm: 0.89
|
|
| 629 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.93
|
|
| 653 | - | - |
LNCaP
(31251020)
|
GPS-Palm: 0.80
Deep-Palm: 0.76
|
|
| 664 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.71
|
|
| 770 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.91
|
|
| 832 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
cerebral cortex
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.