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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
C9JJQ8 TUBA4A Tubulin alpha chain Homo sapiens (Human) 198 aa

Protein Details: C9JJQ8 (TUBA4A)

Protein Information
Accession C9JJQ8
Protein Names Tubulin alpha chain
Gene Symbol TUBA4A
Organism Homo sapiens (Human)
Length 198 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.963
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
26
LNCaP cells
Specificity: 0.963
26/46 (56.5%)
1
PC3 cells
Specificity: 0.037
1/4 (25.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MAPILPGTRR11VTSGASPQVP21LPFWRECISV31HVGQAGVQMG41NACWELYCLE
51-10051HGIQPDGQMP61SDKTIGGGDD71SFTTFFCETG81AGKHVPRAVF91VDLEPTVIDE
101-150101IRNGPYRQLF111HPEQLITGKE121DAANNYARGH131YTIGKEIIDP141VLDRIRKLSD
151-198151QCTGLQGFLV161FHSFGGGTGS171GFTSLLMERL181SVDYGKKSKL191EFSIYPAP
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
27 Prediction (Low) - -
77 CYSMODDB SWISSPALM DBPTM - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
108 Y → C 0.002545 SNP Missense Mutation GBM
123 R → C 0.001887 SNP Missense Mutation UCEC
158 S → C 0.001014 SNP Missense Mutation BRCA
210 Y → C 0.002506 SNP Missense Mutation COAD
221 R → C 0.003774 SNP Missense Mutation UCEC
229 R → C 0.005660 SNP Missense Mutation UCEC
243 R → C 0.002288 SNP Missense Mutation STAD
243 R → C 0.001887 SNP Missense Mutation UCEC
277 S → C 0.002427 SNP Missense Mutation BLCA
339 R → C 0.001887 SNP Missense Mutation UCEC
350 G → C 0.001887 SNP Missense Mutation UCEC