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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
C9JZD1 ARPC3 Actin related protein 2/3 complex … Homo sapiens (Human) 99 aa

Protein Details: C9JZD1 (ARPC3)

Protein Information
AccessionC9JZD1
Protein NamesActin related protein 2/3 complex subunit 3
Gene SymbolARPC3
OrganismHomo sapiens (Human)
Length99 aa
IsoformsNo isoforms
Related PMIDs 31382980 32944167 36430497
Database SourcesSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MPAYHSSLMD11PDTKLIGNMA21LLPIRSQFKG31PAPRETKDTD41IVDEAIYYFK
51-9951ANVFFKNYEI61KNEADRTLIY71ITLYISECLK81KLQKCNSKSQ91EVMRAYLQQ
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
78 - - -
Deep-Palm: 0.78
85 - - -
Deep-Palm: 0.57
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
PC3
Specificity: 0.600
3/3 (100.0%)
1
U937 cell
Specificity: 0.200
1/1 (100.0%)
1
cerebral cortex
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
91 G → C 0.002288 SNP Missense Mutation STAD