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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
C9JZR2 CTNND1 Catenin delta 1 Homo sapiens (Human) 938 aa

Protein Details: C9JZR2 (CTNND1)

Protein Information
Accession C9JZR2
Protein Names Catenin delta 1
Gene Symbol CTNND1
Organism Homo sapiens (Human)
Length 938 aa
Isoforms No isoforms
Related PMIDs 19801377 29575903 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.533
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
8
LNCaP cells
Specificity: 0.533
8/46 (17.4%)
4
PC3 cells
Specificity: 0.267
4/4 (100.0%)
2
DU145 cells
Specificity: 0.133
2/2 (100.0%)
1
HeLa cells
Specificity: 0.067
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDDSEVESTA11SILASVKEQE21AQFEKLTRAL31EEERRHVSAQ41LERVRVSPQD
51-10051ANPLMANGTL61TRRHQNGRFV71GDADLERQKF81SDLKLNGPQD91HSHLLYSTIP
101-150101RMQEPGQIVE111TYTEEDPEGA121MSVVSVETSD131DGTTRRTETT141VKKVVKTVTT
151-200151RTVQPVAMGP161DGLPVDASSV171SNNYIQTLGR181DFRKNGNGGP191GPYVGQAGTA
201-250201TLPRNFHYPP211DGYSRHYEDG221YPGGSDNYGS231LSRVTRIEER241YRPSMEGYRA
251-300251PSRQDVYGPQ261PQVRVGGSSV271DLHRFHPEPY281GLEDDQRSMG291YDDLDYGMMS
301-350301DYGTARRTGT311PSDPRRRLRS321YEDMIGEEVP331SDQYYWAPLA341QHERGSLASL
351-400351DSLRKGGPPP361PNWRQPELPE371VIAMLGFRLD381AVKSNAAAYL391QHLCYRNDKV
401-450401KTDVRKLKGI411PVLVGLLDHP421KKEVHLGACG431ALKNISFGRD441QDNKIAIKNC
451-500451DGVPALVRLL461RKARDMDLTE471VITGTLWNLS481SHDSIKMEIV491DHALHALTDE
501-550501VIIPHSGWER511EPNEDCKPRH521IEWESVLTNT531AGCLRNVSSE541RSEARRKLRE
551-600551CDGLVDALIF561IVQAEIGQKD571SDSKLVENCV581CLLRNLSYQV591HREIPQAERY
601-650601QEAAPNVANN611TGPHAASCFG621AKKGKDEWFS631RGKKPIEDPA641NDTVDFPKRT
651-700651SPARGYELLF661QPEVVRIYIS671LLKESKTPAI681LEASAGAIQN691LCAGRWTYGR
701-750701YIRSALRQEK711ALSAIADLLT721NEHERVVKAA731SGALRNLAVD741ARNKELIGKH
751-800751AIPNLVKNLP761GGQQNSSWNF771SEDTVISILN781TINEVIAENL791EAAKKLRETQ
801-850801GIEKLVLINK811SGNRSEKEVR821AAALVLQTIW831GYKELRKPLE841KEGWKKSDFQ
851-900851VNLNNASRSQ861SSHSYDDSTL871PLIDRNQKSD881KKPDREEIQM891SNMGSNTKSL
901-938901DNNYSTPNER911GDHNRTLDRS921GDLGDMEPLK931GTTPLMKI
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
394 CYSMODDB SWISSPALM DBPTM Prediction (Medium) - -
429 Prediction (Medium) - -
450 Prediction (Medium) - -
533 Prediction (High) - -
551 Prediction (Medium) - -
579 Prediction (High) - -
581 Prediction (High) - -
618 Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) - 29575903, 19801377
692 Prediction (Medium) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
280 Y → C 0.002033 SNP Missense Mutation LUSC
290 G → C 0.001764 SNP Missense Mutation LUAD
450 C → W 0.001887 SNP Missense Mutation UCEC
497 L → Cfs*13 0.002427 DEL Frame Shift Del BLCA
533 C → C 0.001887 SNP Silent UCEC
777 S → C 0.004219 SNP Missense Mutation SARC