Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| D3YUM1 | Ndufv1 | NADH dehydrogenase [ubiquinone] flavoprotein 1, … | Mus musculus (Mouse) | 455 aa |
Protein Details: D3YUM1 (Ndufv1)
Protein Information
| Accession | D3YUM1 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (EC 7.1.1.2) |
| Gene Symbol | Ndufv1 |
| Organism | Mus musculus (Mouse) |
| Length | 455 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLAARHFLGG11LVPVRTAPKK21TSFGSLKDED31RIFTNLYGRH41DWRLKGALRR
51-10051GDWYKTKEIL61LKGPDWILGE71MKTSGLRGRG81GAGFPTGLKW91SFMNKPSDGR
101-150101PKYLVVNADE111GEPGTCKDRE121IMRHDPHKLV131EGCLVGGRAM141GARAAYIYIR
151-200151GEFYNEASNL161QVAIREAYEA171GLIGKNACGS181DYDFDVFVVR191GAGAYICGEE
201-250201TALIESIEGK211QGKPRLKPPF221PADVGVFGCP231TTVANVETVA241VSPTICRRGG
251-300251TWFAGFGRER261NSGTKLFNIS271GHVNHPCTVE281EEMSVPLKEL291IEKHAGGVTG
301-350301GWDNLLAVIP311GGSSTPLIPK321SVCETVLMDF331DALVQAQTGL341GTAAVIVMDR
351-400351STDIVKAIAR361LIEFYKHESC371GQCTPCREGV381DWMNKVMARF391VKGDARPAEI
401-450401DSLWEISKQI411EGHTICALGD421GAAWPVQGLI431RHFRPELEDR441MQRFAQQHRA
451-455451WQAAS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 116 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.71
|
|
| 133 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 178 | - | - |
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 197 | - | - |
Liver
(34884899)
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.93
|
|
| 229 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.95
|
|
| 246 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.90
|
| 277 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.95
|
|
| 323 | - | - | - |
Deep-Palm: 0.77
|
|
| 370 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.11
|
|
| 373 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.04
|
|
| 376 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.03
|
|
| 416 | SWISSPALM DBPTM CYSMODDB | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region |
Forebrain
(28680068)
|
Liver
(34884899)
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
35
Brain tissue (Mass)
Specificity: 1.000
35/56 (62.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.