Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| D3Z656 | Synj1 | Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol … | Mus musculus (Mouse) | 1607 aa |
Protein Details: D3Z656 (Synj1)
Protein Information
| Accession | D3Z656 |
|---|---|
| Protein Names | Synaptojanin-1 (EC 3.1.3.36) (Synaptic inositol 1,4,5-trisphosphate 5-phosphatase 1) |
| Gene Symbol | Synj1 |
| Organism | Mus musculus (Mouse) |
| Length | 1607 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRKSWTCWSG11SDASGGCSGG21GCGRRRRRSR31RKRAASEERR41MAFSKGFRIY
51-10051HKLDPPPFSL61IVETRHKEEC71LMFESGAVAV81LSSAEKEAIK91GTYAKVLDAY
101-150101GLLGVLRLNL111GDTMLHYLVL121VTGCMSVGKI131QESEVFRVTS141TEFISLRVDA
151-200151SDEDRISEVR161KVLNSGNFYF171AWSASGVSLD181LSLNAHRSMQ191EHTTDNRFFW
201-250201NQSLHLHLKH211YGVNCDDWLL221RLMCGGVEIR231TIYAAHKQAK241ACLISRLSCE
251-300251RAGTRFNVRG261TNDDGHVANF271VETEQVIYLD281DCVSSFIQIR291GSVPLFWEQP
301-350301GLQVGSHRVR311MSRGFEANAP321AFDRHFRTLK331DLYGKQIVVN341LLGSKEGEHM
351-400351LSKAFQSHLK361ASEHASDIHM371VSFDYHQMVK381GGKAEKLHSI391LKPQVQKFLD
401-450401YGFFYFDGSE411VQRCQSGTVR421TNCLDCLDRT431NSVQAFLGLE441MLAKQLEALG
451-500451LAEKPQLVTR461FQEVFRSMWS471VNGDSISKIY481AGTGALEGKA491KLKDGARSVT
501-550501RTIQNNFFDS511SKQEAIDVLL521LGNTLNSDLA531DKARALLTTG541SLRVSEQTLQ
551-600551SASSKVLKNM561CENFYKYSKP571KKIRVCVGTW581NVNGGKQFRS591IAFKNQTLTD
601-650601WLLDAPKLAG611IQEFQDKRSK621PTDIFAIGFE631EMVELNAGNI641VNASTTNQKL
651-700651WAVELQKTIS661RDNKYVLLAS671EQLVGVCLFV681FIRPQHAPFI691RDVAVDTVKT
701-750701GMGGATGNKG711AVAIRMLFHT721TSLCFVCSHF731AAGQSQVKER741NEDFVEIARK
751-800751LSFPMGRMLF761SHDYVFWCGD771FNYRIDLPNE781EVKELIRQQN791WDSLIAGDQL
801-850801INQKNAGQIF811RGFLEGKVTF821APTYKYDLFS831EDYDTSEKCR841TPAWTDRVLW
851-900851RRRKWPFDRS861AEDLDLLNAS871FQDESKILYT881WTPGTLLHYG891RAELKTSDHR
901-950901PVVALIDIDI911FEVEAEERQK921IYKEVIAVQG931PPDGTVLVSI941KSSAQESTFF
951-1000951DDALIDELLR961QFAHFGEVIL971IRFVEDKMWV981TFLEGSSALN991ALSLNGKELL
1001-10501001NRTITITLKS1011PDWIKHLEEE1021MSLEKISVTL1031PSSASSTLLG1041EDAEVAADFD
1051-11001051MEGDVDDYSA1061EVEELLPQHL1071QPSSSSGLGT1081SPSSSPRTSP1091CQSPTVPEYS
1101-11501101APSLPIRPSR1111APSRTPGPPS1121SQGSPVDTQP1131AAQKDSSQTL1141EPKRPPPPRP
1151-12001151VAPPARPAPP1161QRPPPPSGAR1171SPAPARKEFG1181GVGAPPSPGV1191ARREIEAPKS
1201-12501201PGTARKDNIG1211RNQPSPQAGL1221AGPGPAGYGA1231ARPTIPARAG1241VISAPQSQAR
1251-13001251VCAGRPTPDS1261QSKPSETLKG1271PAVLPEPLKP1281QAAFPQQPSL1291PTPAQKLQDP
1301-13501301LVPIAAPTMP1311PSGPQPNLET1321PPQPPPRSRS1331SQSLPSDSSP1341QLQVKINGIS
1351-14001351GVKQEPTLKS1361DPFEDLSLSV1371LAVSKAQPSV1381QISPVLTPDP1391KMLIQLPSAS
1401-14501401QSQVNPLSSV1411SCMPTRPPGP1421EESKSQESMG1431SSANPFPSLP1441CRNPFTDRTA
1451-15001451APGNPFRVQS1461QESEATSWLS1471KEEPVPNSPF1481PPLMPLSHDT1491SKASSSLGGF
1501-15501501EDNFDLQSQS1511TVKTSNPKGW1521VTFDEDDNFP1531TTGKSKSVCP1541DLVGNAPASF
1551-16001551DDDWSKGASV1561SFCVLPARRP1571PPPPPPVPLL1581PPGTTSSAGP1591STTLPSKAPS
1601-16071601TLDFTER
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
Deep-Palm: 0.03
|
|
| 17 | - | - | - |
Deep-Palm: 0.79
|
|
| 22 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.87
|
|
| 70 | - | - | - |
Deep-Palm: 0.89
|
|
| 124 | - | - | - |
Deep-Palm: 0.88
|
|
| 215 | - | - | - |
Deep-Palm: 0.40
|
|
| 224 | - | - | - |
Deep-Palm: 0.35
|
|
| 242 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.92
|
|
| 249 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.93
|
|
| 282 | - | - | - |
Deep-Palm: 0.43
|
|
| 414 | - | - | - |
Deep-Palm: 0.07
|
|
| 423 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.49
|
|
| 426 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.52
|
|
| 561 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.56
|
|
| 576 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.18
|
|
| 677 | - | - | - |
Deep-Palm: 0.91
|
|
| 724 | - | - | - |
Deep-Palm: 0.76
|
|
| 727 | - | - | - |
Deep-Palm: 0.71
|
|
| 768 | - | - | - |
Deep-Palm: 0.03
|
|
| 839 | - | - | - |
Deep-Palm: 0.36
|
|
| 1091 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
| 1252 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.87
|
|
| 1412 | - | - | - |
Deep-Palm: 0.74
|
|
| 1441 | - | - | - |
Deep-Palm: 0.68
|
|
| 1539 | - | - | - |
Deep-Palm: 0.70
|
|
| 1563 | - | - | - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 0.037
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
26
Brain tissue (Mass)
Specificity: 0.963
26/56 (46.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.