Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| D3Z7H6 | Ctnnd1 | Catenin delta 1 | Mus musculus (Mouse) | 837 aa |
Protein Details: D3Z7H6 (Ctnnd1)
Protein Information
| Accession | D3Z7H6 |
|---|---|
| Protein Names | Catenin delta 1 |
| Gene Symbol | Ctnnd1 |
| Organism | Mus musculus (Mouse) |
| Length | 837 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQEPGQIVET11YTEEDPEGAM21SVVSVETTDD31GTTRRTETTV41KKVVKTMTTR
51-10051TVQPVPMGPD61GLPVDASAVS71NNYIQTLGRD81FRKNGNGGPG91PYVGQAGTAT
101-150101LPRNFHYPPD111GYGRHYEDGY121PGGSDNYGSL131SRVTRIEERY141RPSMEGYRAP
151-200151SRQDVYGPQP161QVRVGGSSVD171LHRFHPEPYG181LEDDQRSMGY191DDLDYGMMSD
201-250201YGTARRTGTP211SDPRRRLRSY221EDMIGEEVPP231DQYYWAPLAQ241HERGSLASLD
251-300251SLRKGMPPPS261NWRQPELPEV271IAMLGFRLDA281VKSNAAAYLQ291HLCYRNDKVK
301-350301TDVRKLKGIP311ILVGLLDHPK321KEVHLGACGA331LKNISFGRDQ341DNKIAIKNCD
351-400351GVPALVRLLR361KARDMDLTEV371ITGTLWNLSS381HDSIKMEIVD391HALHALTDEV
401-450401IIPHSGWERE411PNEDCKPRHI421EWESVLTNTA431GCLRNVSSER441SEARRKLREC
451-500451DGLVDALIFI461VQAEIGQKDS471DSKLVENCVC481LLRNLSYQVH491REIPQAERYQ
501-550501EALPTVANST511GPHAASCFGA521KKGKDEWFSR531GKKPTEDPAN541DTVDFPKRTS
551-600551PARGYELLFQ561PEVVRIYISL571LKESKTPAIL581EASAGAIQNL591CAGRWTYGRY
601-650601IRSALRQEKA611LSAIAELLTS621EHERVVKAAS631GALRNLAVDA641RNKELIGKHA
651-700651IPNLVKNLPG661GQQNSSWNFS671EDTVVSILNT681INEVIAENLE691AAKKLRETQG
701-750701IEKLVLINKS711GNRSEKEVRA721AALVLQTIWG731YKELRKPLEK741EGWKKSDFQV
751-800751NLNNASRSQS761SHSYDDSTLP771LIDRNQKSDK781KPDREEIPMS791NMGSNTKSLD
801-837801NNYSTLNERG811DHNRTLDRSG821DLGDMEPLKG831APLMQKI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 293 | - | - | - |
Deep-Palm: 0.96
|
|
| 328 | - | - | - |
Deep-Palm: 0.95
|
|
| 349 | - | - | - |
Deep-Palm: 0.98
|
|
| 415 | - | - | - |
Deep-Palm: 0.16
|
|
| 432 | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.94
|
|
| 450 | - | - | - |
Deep-Palm: 0.97
|
|
| 478 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 480 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 517 | - |
liver
(26165157)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.92
|
|
| 591 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.846
11
Brain tissue (Mass)
Specificity: 0.846
11/56 (19.6%)
2
Liver tissue (Mass)
Specificity: 0.154
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.