Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| D6RAT0 | RPS3A | Small ribosomal subunit protein eS1 | Homo sapiens (Human) | 227 aa |
Protein Details: D6RAT0 (RPS3A)
Protein Information
| Accession | D6RAT0 |
|---|---|
| Protein Names | Small ribosomal subunit protein eS1 |
| Gene Symbol | RPS3A |
| Organism | Homo sapiens (Human) |
| Length | 227 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFNIRNIGKT11LVTRTQGTKI21ASDGLKGRVF31EVSLADLQND41EVAFRKFKLI
51-10051TEDVQGKNCL61TNFHGMDLTR71DKMCSMVKKW81QTMIEAHVDV91KTTDGYLLRL
101-150101FCVGFTKKRN111NQIRKTSYAQ121HQQVRQIRKK131MMEIMTREVQ141TNDLKEVVNK
151-200151LIPDSIGKDI161EKACQSIYPL171HDVFVRKVKM181LKKPKFELGK191LMELHGEGSS
201-227201SGKATGDETG211AKVERADGYE221PPVQESV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 59 | - | - | - |
Deep-Palm: 0.37
|
|
| 74 | - | - | - |
Deep-Palm: 0.27
|
|
| 102 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family |
HeLa
(29575903)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.92
|
| 164 | SWISSPALM DBPTM CYSMODDB | Ribosomal S3Ae family | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.89
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
LNCaP
Specificity: 0.750
3/3 (100.0%)
1
U937 cell
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.