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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
D6RGE9 ATP2C1 ATPase secretory pathway Ca2+ transporting … Homo sapiens (Human) 82 aa

Protein Details: D6RGE9 (ATP2C1)

Protein Information
Accession D6RGE9
Protein Names ATPase secretory pathway Ca2+ transporting 1
Gene Symbol ATP2C1
Organism Homo sapiens (Human)
Length 82 aa
Isoforms No isoforms
Related PMIDs 29575903 32944167
Database Sources No database sources
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
3
PC3 cells
Specificity: 0.750
3/4 (75.0%)
1
HeLa cells
Specificity: 0.250
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
LNCaP cells
Specificity: 0.000
0/46 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MIPVLTSKKA11SELPVSEVAS21ILQADLQNGL31NKCEVSHRRA41FHGWNEFDIS
51-8251EDEPLWKKYI61SQFKNPLIML71LLASAVISVL81MH
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
33 Prediction (Low) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
143 R → C 0.001887 SNP Missense Mutation UCEC
195 C → Vfs*4 0.001014 DEL Frame Shift Del BRCA
409 C → C 0.002506 SNP Silent COAD
490 C → Y 0.001969 SNP Missense Mutation HNSC
760 R → C 0.002506 SNP Missense Mutation COAD
814 C → C 0.002288 SNP Silent STAD
972 C → F 0.001764 SNP Missense Mutation LUAD