Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| E7ETP9 | LAMP3 | Lysosome-associated membrane glycoprotein 3 (DC-lysosome-associated … | Homo sapiens (Human) | 392 aa |
Protein Details: E7ETP9 (LAMP3)
Protein Information
| Accession | E7ETP9 |
|---|---|
| Protein Names | Lysosome-associated membrane glycoprotein 3 (DC-lysosome-associated membrane glycoprotein) |
| Gene Symbol | LAMP3 |
| Organism | Homo sapiens (Human) |
| Length | 392 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRAKAFPETR11DYSQPTAAAT21VQDIKKPVQQ31PAKQAPHQTL41AARFMDGHIT
51-10051FQTAATVKIP61TTTPATTKNT71ATTSPITYTL81VTTQATPNNS91HTAPPVTEVT
101-150101VGPSLAPYSL111PPTITPPAHT121TGTSSSTVSH131TTGNTTQPSN141QTTLPATLSI
151-200151ALHKSTTGQK161PVQPTHAPGT171TAAAHNTTRT181AAPASTVPGP191TLAPQPSSVK
201-250201TGIYQVLNGS211RLCIKAEMGI221QLIVQDKESV231FSPRRYFNID241PNATQASGNC
251-300251GTRKSNLLLN261FQGGFVNLTF271TKDEESYYIS281EVGAYLTVSD291PETIYQGIKH
301-350301AVVMFQTAVG311HSFKCVSEQS321LQLSAHLQVK331TTDVQLQAFD341FEDDHFGNVD
351-392351ECSSDYTIVL361PVIGAIVVGL371CLMGMGVYKI381RLRCQSSGYQ391RI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 213 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.80
|
|
| 250 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.78
|
|
| 315 | - | - | - |
Deep-Palm: 0.63
|
|
| 352 | - | - | - |
Deep-Palm: 0.13
|
|
| 371 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 384 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 36 | Y → C | 0.002288 | SNP | Missense Mutation | STAD |
| 237 | C → C | 0.002976 | SNP | Silent | KIRC |
| 376 | C → C | 0.001887 | SNP | Silent | UCEC |
| 405 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 411 | S → C | 0.001969 | SNP | Missense Mutation | HNSC |