Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| E9PCR7 | OGDH | 2-oxoglutarate dehydrogenase complex component E1 … | Homo sapiens (Human) | 1038 aa |
Protein Details: E9PCR7 (OGDH)
Protein Information
| Accession | E9PCR7 |
|---|---|
| Protein Names | 2-oxoglutarate dehydrogenase complex component E1 (EC 1.2.4.2) (2-oxoglutarate dehydrogenase, mitochondrial) (Alpha-ketoglutarate dehydrogenase) (Thiamine diphosphate (ThDP)-dependent 2-oxoglutarate dehydrogenase) |
| Gene Symbol | OGDH |
| Organism | Homo sapiens (Human) |
| Length | 1038 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MFHLRTCAAK11LRPLTASQTV21KTFSQNRPAA31ARTFQQIRCY41SAPVAAEPFL
51-10051SGTSSNYVEE61MYCAWLENPK71SVHKSWDIFF81RNTNAGAPPG91TAYQSPLPLS
101-150101RGSLAAVAHA111QSLVEAQPNV121DKLVEDHLAV131QSLIRAYQIR141GHHVAQLDPL
151-200151GILDADLDSS161VPADIISSTD171KLDLAVFKER181LRMLTVGGFY191GLDESDLDKV
201-250201FHLPTTTFIG211GQESALPLRE221IIRRLEMAYC231QHIGVEFMFI241NDLEQCQWIR
251-300251QKFETPGIMQ261FTNEEKRTLL271ARLVRSTRFE281EFLQRKWSSE291KRFGLEGCEV
301-350301LIPALKTIID311KSSENGVDYV321IMGMPHRGRL331NVLANVIRKE341LEQIFCQFDS
351-400351KLEAADEGSG361DVKYHLGMYH371RRINRVTDRN381ITLSLVANPS391HLEAADPVVM
401-450401GKTKAEQFYC411GDTEGKKVMS421ILLHGDAAFA431GQGIVYETFH441LSDLPSYTTH
451-500451GTVHVVVNNQ461IGFTTDPRMA471RSSPYPTDVA481RVVNAPIFHV491NSDDPEAVMY
501-550501VCKVAAEWRS511TFHKDVVVDL521VCYRRNGHNE531MDEPMFTQPL541MYKQIRKQKP
551-600551VLQKYAELLV561SQGVVNQPEY571EEEISKYDKI581CEEAFARSKD591EKILHIKHWL
601-650601DSPWPGFFTL611DGQPRSMSCP621STGLTEDILT631HIGNVASSVP641VENFTIHGGL
651-700651SRILKTRGEM661VKNRTVDWAL671AEYMAFGSLL681KEGIHIRLSG691QDVERGTFSH
701-750701RHHVLHDQNV711DKRTCIPMNH721LWPNQAPYTV731CNSSLSEYGV741LGFELGFAMA
751-800751SPNALVLWEA761QFGDFHNTAQ771CIIDQFICPG781QAKWVRQNGI791VLLLPHGMEG
801-850801MGPEHSSARP811ERFLQMCNDD821PDVLPDLKEA831NFDINQLYDC841NWVVVNCSTP
851-900851GNFFHVLRRQ861ILLPFRKPLI871IFTPKSLLRH881PEARSSFDEM891LPGTHFQRVI
901-950901PEDGPAAQNP911ENVKRLLFCT921GKVYYDLTRE931RKARDMVGQV941AITRIEQLSP
951-1000951FPFDLLLKEV961QKYPNAELAW971CQEEHKNQGY981YDYVKPRLRT991TISRAKPVWY
1001-10381001AGRDPAAAPA1011TGNKKTHLTE1021LQRLLDTAFD1031LDVFKNFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.06
|
|
| 39 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.81
|
|
| 63 | - | - | - |
Deep-Palm: 0.09
|
|
| 230 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.70
|
|
| 246 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.05
|
|
| 298 | - | - |
cerebral cortex
(36430497)
LNCaP
(31251020)
|
GPS-Palm: 0.91
Deep-Palm: 0.97
|
|
| 346 | - | - |
LNCaP
(31251020)
|
GPS-Palm: 0.81
Deep-Palm: 0.94
|
|
| 410 | - | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.69
Deep-Palm: 0.92
|
|
| 502 | - | - |
cerebral cortex
(36430497)
LNCaP
(31251020)
Unknown
(32651440)
|
Deep-Palm: 0.11
|
|
| 522 | - | - |
cerebral cortex
(36430497)
LNCaP
(31251020)
|
GPS-Palm: 0.87
Deep-Palm: 0.38
|
|
| 581 | - | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.84
Deep-Palm: 0.62
|
|
| 619 | - | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.78
Deep-Palm: 0.77
|
|
| 715 | - | - | - |
Deep-Palm: 0.04
|
|
| 731 | - | - | - |
Deep-Palm: 0.58
|
|
| 771 | - | - | - |
Deep-Palm: 0.11
|
|
| 778 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.11
|
|
| 817 | - | - |
cerebral cortex
(36430497)
LNCaP
(31251020)
|
Deep-Palm: 0.85
|
|
| 840 | - | - | - |
Deep-Palm: 0.06
|
|
| 847 | - | - | - |
Deep-Palm: 0.09
|
|
| 919 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.96
|
|
| 971 | - | - | - |
Deep-Palm: 0.80
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
cerebral cortex
Specificity: 0.333
4/4 (100.0%)
3
LNCaP
Specificity: 0.250
3/3 (100.0%)
1
U937 cell
Specificity: 0.083
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Cerebral Cortex (Mass)
Specificity: 0.333
4/4 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 41 | S → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 81 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 81 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 277 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 283 | C → C | 0.001887 | SNP | Silent | UCEC |
| 604 | C → C | 0.001764 | SNP | Silent | LUAD |
| 653 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 686 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 700 | C → S | 0.001764 | SNP | Missense Mutation | LUAD |
| 713 | Y → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 769 | W → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 794 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 864 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 904 | C → C | 0.001969 | SNP | Silent | LGG |
| 909 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |