Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
E9PLD0 RAB1B RAB1B, member RAS oncogene family Homo sapiens (Human) 169 aa

Protein Details: E9PLD0 (RAB1B)

Protein Information
Accession E9PLD0
Protein Names RAB1B, member RAS oncogene family
Gene Symbol RAB1B
Organism Homo sapiens (Human)
Length 169 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.862
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
25
LNCaP cells
Specificity: 0.862
25/46 (54.3%)
4
PC3 cells
Specificity: 0.138
4/4 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MNPEYDYLFK11LLLIGDSGVG21KSCLLLRFAD31DTYTESYIST41IGVDFKIRTI
51-10051ELDGKTIKLQ61IESYANVKQW71LQEIDRYASE81NVNKLLVGNK91SDLTTKKVVD
101-150101NTTAKEFADS111LGIPFLETSA121KNATNVEQAF131MTMAAEIKKR141MGPGAASGGE
151-169151RPNLKIDSTP161VKPAGGGCC
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
23 CYSMODDB SWISSPALM DBPTM Prediction (Medium) Ras family -
168 Prediction (High) - -
169 Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
88 Y → C 0.002141 SNP Missense Mutation SKCM
200 C → Y 0.002288 SNP Missense Mutation STAD
200 C → S 0.002033 SNP Missense Mutation LUSC