Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| E9Q6L9 | Lrrc7 | Leucine-rich repeat-containing protein 7 (Densin-180) … | Mus musculus (Mouse) | 1542 aa |
Protein Details: E9Q6L9 (Lrrc7)
Protein Information
| Accession | E9Q6L9 |
|---|---|
| Protein Names | Leucine-rich repeat-containing protein 7 (Densin-180) (Protein LAP1) |
| Gene Symbol | Lrrc7 |
| Organism | Mus musculus (Mouse) |
| Length | 1542 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQCLEMTTKR11KLIGRLVPCR21CFRGEEEIIS31VLDYSHCSLQ41QVPKEVFNFE
51-10051RTLEELYLDA61NQIEELPKQL71FNCQALRKLS81IPDNDLSSLP91TSIASLVNLK
101-150101ELDISKNGVQ111EFPENIKCCK121CLTIIEASVN131PISKLPDGFT141QLLNLTQLYL
151-200151NDAFLEFLPA161NFGRLVKLRI171LELRENHLKT181LPKSMHKLAQ191LERLDLGNNE
201-250201FSELPEVLDQ211IQNLRELWMD221NNALQVLPGS231IGKLKMLVYL241DMSKNRIETV
251-300251DMDISGCEAL261EDLLLSSNML271QQLPDSIGLL281KKLTTLKVDD291NQLTMLPNTI
301-350301GNLSLLEEFD311CSCNELESLP321PTIGYLHSLR331TLAVDENFLP341ELPREIGSCK
351-400351NVTVMSLRSN361KLEFLPEEIG371QMQRLRVLNL381SDNRLKNLPF391SFTKLKELAA
401-450401LWLSDNQSKA411LIPLQTEAHP421ETKQRVLTNY431MFPQQPRGDE441DFQSDSDSFN
451-500451PTLWEEQRQQ461RMTVAFEFED471KKEDDESAGK481VKALSCQAPW491DRGQRGITLQ
501-550501PARLSGDCCT511PWARCDQQIQ521DMPVPQSDPQ531LAWGCISGLQ541QERSMCAPLP
551-600551VAAQSTTLPS561LSGRQVEINL571KRYPTPYPED581LKNMVKSVQN591LVGKPSHGVR
601-650601VENSNPTANT611EQTVKEKFEH621KWPVAPKEIT631VEDSFVHPAN641EMRIGELHPS
651-700651LAETPLYPPK661LVLLGKDKKE671STDESEVDKT681HCLNNSVSSG691TYSDYSPSQA
701-750701SSASSNTRMK711VGSLQATAKD721AVHNSLWGNR731IAPPFPQPLD741AKPLLSQREA
751-800751VPPGNIPQRP761DRLPMSDAFP771DNWTDGSHYD781NTGFVSEEAA791GENANNNPLL
801-850801SSKARSVPAH811GRRPLIRQER821IVGVPLELEQ831STHRHTPETE841VPPSNPWQNW
851-900851TRTPSPFEDR861TAFPSKLETT871PTTSPLPERK881DHMKEPTETP891GPFSPGVPWE
901-950901YHDPTPNRSL911GNVFSQIHCR921PDSSKGVIAI931SKSTERLSPL941MKDIKSNKFK
951-1000951KSQSIDEIDV961GTYKVYNIPL971ENYASGSDHL981GSHERPDKFL991GPEHGMSSMS
1001-10501001RSQSVPMLDD1011EMLMYGSSKG1021PPQQKASMTK1031KVYQFDQSFN1041PQGAVEVKAE
1051-11001051KRIPPPFAHN1061SEYVQQPSKN1071IAKDLVSPRA1081YRGYPPMEQM1091FSFSQPSVNE
1101-11501101DAMVNAQFAS1111QGPRAGFLRR1121ADSLASSTEM1131AMFRRVSEPH1141ELPPGDRYGR
1151-12001151ATYRGGLEGQ1161SSISMTDPQF1171LKRNGRYEDE1181HPSYQEVKAQ1191AGSFPAKNLT
1201-12501201QRRPLSARSY1211STESYGASQT1221RPVSARPTMA1231ALLEKIPSDY1241NLGNYGDKTS
1251-13001251DNSDIKTRPT1261PVKGEESCGK1271MPADWRQQLL1281RHIEARRLDR1291NAAYKHNTVN
1301-13501301LGMLPYGGIS1311AMHAGRSMTL1321NLQTKSKFDL1331QDLPLQKTPS1341QQSNILDNGQ
1351-14001351EDVSPSGQWN1361PYPLGRRDVP1371PDTITKKAGS1381HIQTLMGSQS1391LQHRSREQQP
1401-14501401YEGNINKVTI1411QQFQSPLPIQ1421IPSSQATRGP1431QPGRCLIQTK1441GQRSMDGYPE
1451-15001451QFCVRIEKNP1461GLGFSISGGI1471SGQGNPFKPS1481DKGIFVTRVQ1491PDGPASNLLQ
1501-15421501PGDKILQANG1511HSFVHMEHEK1521AVLLLKSFQN1531TVDLVIQREL1541TV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.04
|
| 19 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.96
|
|
| 21 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
|
| 37 | SWISSPALM DBPTM CYSMODDB | Synaptic Scaffolding LAP/MAGUK Families |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.76
|
| 73 | SWISSPALM DBPTM CYSMODDB | Leucine rich repeat |
Forebrain
(28680068)
|
Brain
(31311849)
|
GPS-Palm: 0.94
Deep-Palm: 0.96
|
| 118 | - | - | - |
Deep-Palm: 0.55
|
|
| 119 | - | - | - |
Deep-Palm: 0.61
|
|
| 121 | - | - | - |
Deep-Palm: 0.67
|
|
| 257 | - | - | - |
Deep-Palm: 0.76
|
|
| 311 | - | - | - |
Deep-Palm: 0.72
|
|
| 313 | - | - | - |
Deep-Palm: 0.55
|
|
| 349 | - | - | - |
Deep-Palm: 0.98
|
|
| 486 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.95
|
|
| 508 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.65
|
|
| 509 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.60
|
|
| 515 | - | - | - |
Deep-Palm: 0.12
|
|
| 535 | - | - | - |
Deep-Palm: 0.54
|
|
| 546 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.85
|
|
| 682 | - | - | - |
Deep-Palm: 0.25
|
|
| 919 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.62
|
|
| 1268 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.81
|
|
| 1435 | - | - | - |
Deep-Palm: 0.65
|
|
| 1453 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.73
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.952
20
Brain tissue (Mass)
Specificity: 0.909
20/56 (35.7%)
1
Neural Stem Cells (Mass)
Specificity: 0.045
1/1 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.