Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| E9QKC0 | Gria2 | Glutamate receptor | Mus musculus (Mouse) | 883 aa |
Protein Details: E9QKC0 (Gria2)
Protein Information
| Accession | E9QKC0 |
|---|---|
| Protein Names | Glutamate receptor |
| Gene Symbol | Gria2 |
| Organism | Mus musculus (Mouse) |
| Length | 883 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MQKIMHISVL11LSPVLWGLIF21GVSSNSIQIG31GLFPRGADQE41YSAFRVGMVQ
51-10051FSTSEFRLTP61HIDNLEVANS71FAVTNAFCSQ81FSRGVYAIFG91FYDKKSVNTI
101-150101TSFCGTLHVS111FITPSFPTDG121THPFVIQMRP131DLKGALLSLI141EYYQWDKFAY
151-200151LYDSDRGLST161LQAVLDSAAE171KKWQVTAINV181GNINNDKKDE191TYRSLFQDLE
201-250201LKKERRVILD211CERDKVNDIV221DQVITIGKHV231KGYHYIIANL241GFTDGDLLKI
251-300251QFGGANVSGF261QIVDYDDSLV271SKFIERWSTL281EEKEYPGAHT291ATIKYTSALT
301-350301YDAVQVMTEA311FRNLRKQRIE321ISRRGNAGDC331LANPAVPWGQ341GVEIERALKQ
351-400351VQVEGLSGNI361KFDQNGKRIN371YTINIMELKT381NGPRKIGYWS391EVDKMVVTLT
401-450401ELPSGNDTSG411LENKTVVVTT421ILESPYVMMK431KNHEMLEGNE441RYEGYCVDLA
451-500451AEIAKHCGFK461YKLTIVGDGK471YGARDADTKI481WNGMVGELVY491GKADIAIAPL
501-550501TITLVREEVI511DFSKPFMSLG521ISIMIKKPQK531SKPGVFSFLD541PLAYEIWMCI
551-600551VFAYIGVSVV561LFLVSRFSPY571EWHTEEFEDG581RETQSSESTN591EFGIFNSLWF
601-650601SLGAFMQQGC611DISPRSLSGR621IVGGVWWFFT631LIIISSYTAN641LAAFLTVERM
651-700651VSPIESAEDL661SKQTEIAYGT671LDSGSTKEFF681RRSKIAVFDK691MWTYMRSAEP
701-750701SVFVRTTAEG711VARVRKSKGK721YAYLLESTMN731EYIEQRKPCD741TMKVGGNLDS
751-800751KGYGIATPKG761SSLRTPVNLA771VLKLSEQGVL781DKLKNKWWYD791KGECGAKDSG
801-850801SKEKTSALSL811SNVAGVFYIL821VGGLGLAMLV831ALIEFCYKSR841AEAKRMKVAK
851-883851NAQNINPSSS861QNSQNFATYK871EGYNVYGIES881VKI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 78 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.37
|
|
| 104 | - | - | - |
Deep-Palm: 0.31
|
|
| 211 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.96
|
|
| 330 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
|
| 446 | - | - | - |
Deep-Palm: 0.49
|
|
| 457 | - | - | - |
Deep-Palm: 0.74
|
|
| 549 | - | - | - |
Deep-Palm: 0.07
|
|
| 610 | - | - |
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.71
|
|
| 739 | - | - | - |
Deep-Palm: 0.50
|
|
| 794 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.92
|
|
| 836 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.050
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.950
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.