Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F5GYK3 | CD5 | CD5 molecule | Homo sapiens (Human) | 165 aa |
Protein Details: F5GYK3 (CD5)
Protein Information
| Accession | F5GYK3 |
|---|---|
| Protein Names | CD5 molecule |
| Gene Symbol | CD5 |
| Organism | Homo sapiens (Human) |
| Length | 165 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPMGSLQPLA11TLYLLGMLVA21SCLGRLSWYD31PDFQARLTRS41NSKCQGQLEV
51-10051YLKDGWHMVC61SQSWGRSSKQ71WEDPSQASKV81CQRLNCGVPL91SLGPFLVTYT
101-150101PQSSIICYGQ111LGSFSNCSHS121RNDMCHSLGL131TCLEPQKTTP141PTTRPPPTTT
151-165151PEPTAMRPRT161RPRTW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 22 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.96
|
|
| 44 | T-cell surface glycoprotein CD5 SRCR domain SRCR-like domain superfamily | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.28
|
|
| 60 | - | - | - |
Deep-Palm: 0.51
|
|
| 81 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.93
|
|
| 86 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.94
|
|
| 107 | - | - | - |
Deep-Palm: 0.25
|
|
| 117 | - | - | - |
Deep-Palm: 0.04
|
|
| 125 | - | - | - |
Deep-Palm: 0.20
|
|
| 132 | - | - | - |
Deep-Palm: 0.16
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Jurkat T cell
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 44 | C → C | 0.002506 | SNP | Silent | COAD |
| 132 | C → S | 0.001764 | SNP | Missense Mutation | LUAD |
| 170 | C → C | 0.001014 | SNP | Silent | BRCA |
| 183 | G → C | 0.002506 | SNP | Missense Mutation | COAD |
| 201 | C → C | 0.001014 | SNP | Silent | BRCA |
| 204 | L → _Q205insCLGNLCNNL | 0.002033 | INS | In Frame Ins | LUSC |
| 292 | R → C | 0.004577 | SNP | Missense Mutation | STAD |
| 292 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 337 | S → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 360 | C → R | 0.001887 | SNP | Missense Mutation | UCEC |
| 374 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 415 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |