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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
F5H5E8 SCARB1 Scavenger receptor class B member … Homo sapiens (Human) 146 aa

Protein Details: F5H5E8 (SCARB1)

Protein Information
Accession F5H5E8
Protein Names Scavenger receptor class B member 1 (SR-BI)
Gene Symbol SCARB1
Organism Homo sapiens (Human)
Length 146 aa
Isoforms No isoforms
Related PMIDs 19801377 29575903 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.844
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
38
LNCaP cells
Specificity: 0.844
38/46 (82.6%)
4
PC3 cells
Specificity: 0.089
4/4 (100.0%)
2
DU145 cells
Specificity: 0.044
2/2 (100.0%)
1
HeLa cells
Specificity: 0.022
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MGCSAKARWA11AGALGVAGLL21CAVLGAVMIV31MVPSLIKQQV41LKNVRIDPSS
51-10051LSFNMWKEIP61IPFYLSVYFF71DVMNPSEILK81GEKPQVRERG91PYVYREFRHK
101-146101SNITFNNNDT111VSFLEYRTFQ121FQPSKSHGSE131SDYIVMPNIL141VLVRLP
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
3 CYSMODDB SWISSPALM DBPTM Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
45 R → C 0.001014 SNP Missense Mutation BRCA
45 R → C 0.001887 SNP Missense Mutation UCEC
246 W → C 0.002288 SNP Missense Mutation STAD
300 R → C 0.002141 SNP Missense Mutation SKCM
323 C → C 0.002506 SNP Silent COAD
453 C → F 0.002033 SNP Missense Mutation LUSC
462 C → Y 0.008130 SNP Missense Mutation THYM