Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F5H6I7 | ATL3 | Atlastin GTPase 3 | Homo sapiens (Human) | 523 aa |
Protein Details: F5H6I7 (ATL3)
Protein Information
| Accession | F5H6I7 |
|---|---|
| Protein Names | Atlastin GTPase 3 |
| Gene Symbol | ATL3 |
| Organism | Homo sapiens (Human) |
| Length | 523 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 32944167 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
24
LNCaP cells
Specificity: 0.857
24/46 (52.2%)
3
PC3 cells
Specificity: 0.107
3/4 (75.0%)
1
U937 cells
Specificity: 0.036
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MESSKPGPVQ11VVLVQKDQHS21FELDEKALAS31ILLQDHIRDL41DVVVVSVAGA
51-10051FRKGKSFILD61FMLRYLYSQK71ESGHSNWLGD81PEEPLTGFSW91RGGSDPETTG
101-150101IQIWSEVFTV111EKPGGKKVAV121VLMDTQGAFD131SQSTVKDCAT141IFALSTMTSS
151-200151VQIYNLSQNI161QEDDLQQLQL171FTEYGRLAMD181EIFQKPFQTL191MFLVRDWSFP
201-250201YEYSYGLQGG211MAFLDKRLQV221KEHQHEEIQN231VRNHIHSCFS241DVTCFLLPHP
251-300251GLQVATSPDF261DGKLKDIAGE271FKEQLQALIP281YVLNPSKLME291KEINGSKVTC
301-350301RGLLEYFKAY311IKIYQGEDLP321HPKSMLQATA331EANNLAAAAS341AKDIYYNNME
351-400351EVCGGEKPYL361SPDILEEKHC371EFKQLALDHF381KKTKKMGGKD391FSFRYQQELE
401-450401EEIKELYENF411CKHNGSKNVF421STFRTPAVLF431TGIVALYIAS441GLTGFIGLEV
451-500451VAQLFNCMVG461LLLIALLTWG471YIRYSGQYRE481LGGAIDFGAA491YVLEQASSHI
501-523501GNSTQATVRD511AVVGRPSMDK521KAQ
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 300 | Prediction (Low) | - | - |
| 457 | Prediction (Low) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 262 | C → C | 0.001887 | SNP | Silent | UCEC |
| 286 | A → Cfs*3 | 0.003559 | INS | Frame Shift Ins | KIRP |
| 489 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 497 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |