Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F6RJV6 | Lancl2 | LanC-like protein 2 (Testis-specific adriamycin … | Mus musculus (Mouse) | 441 aa |
Protein Details: F6RJV6 (Lancl2)
Protein Information
| Accession | F6RJV6 |
|---|---|
| Protein Names | LanC-like protein 2 (Testis-specific adriamycin sensitivity protein) |
| Gene Symbol | Lancl2 |
| Organism | Mus musculus (Mouse) |
| Length | 441 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501KFHLGEAEME11ERSFPNPFPD21YEAAASAAGL31AAGSAEETGR41VCPLPTTEDP
51-10051GLPFHPNGKI61VPNFIKRIQT71KIKDLLQQME81EGLKTADPHD91CSAYTGWTGI
101-150101ALLYLQLYRV111TGDQTYLLRS121LDYVKRTLRN131LSGRRVTFLC141GDAGPLAVGA
151-200151VIYHKLKSEC161ESQECITKLL171QMHRTIVCQE181SELPDELLYG191RAGYLYALLY
201-250201LNTEIGPGTV211GETAIKEVVS221AIIESGKSLS231REERKSERCP241LLYQWHRKQY
251-300251VGAAHGMAGI261YYMLMQPEAK271VDQETLTEMV281KPSIDYVRHK291KFRSGNYPSS
301-350301LSNETDRLVH311WCHGAPGVIH321VLLQAYQVFK331EEKYLKEAME341CSDVIWQRGL
351-400351LRKGYGICHG361TSGNGYSFLS371LYRLTQDKKY381LYRACKFAEW391CLDYGAHGCR
401-441401IPDRPYSLFE411GMAGAVHFLS421DILVPETARF431PAFELGFLQK441D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 42 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.98
|
|
| 91 | - | - | - |
Deep-Palm: 0.79
|
|
| 140 | SWISSPALM DBPTM CYSMODDB | Lanthionine synthetase C-like protein |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.74
Deep-Palm: 0.98
|
| 160 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 165 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.36
|
|
| 178 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.87
|
|
| 239 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.95
|
|
| 312 | - | - | - |
Deep-Palm: 0.36
|
|
| 341 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.74
Deep-Palm: 0.91
|
|
| 358 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.65
|
|
| 385 | - | - | - |
Deep-Palm: 0.62
|
|
| 391 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.19
|
|
| 399 | - | - | - |
Deep-Palm: 0.39
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
20
Brain tissue (Mass)
Specificity: 1.000
20/56 (35.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.