Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F8VPN4 | Agl | Glycogen debranching enzyme (EC 2.4.1.25) … | Mus musculus (Mouse) | 1532 aa |
Protein Details: F8VPN4 (Agl)
Protein Information
| Accession | F8VPN4 |
|---|---|
| Protein Names | Glycogen debranching enzyme (EC 2.4.1.25) (EC 3.2.1.33) (Glycogen debrancher) |
| Gene Symbol | Agl |
| Organism | Mus musculus (Mouse) |
| Length | 1532 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEHSKQIRIL11LLNEMEKLEK21TLFRLEQGFE31LQFRLGPTLQ41GKAVTVYTNY
51-10051PLPGEAFNRE61KFRSLDWENP71TEREDDSDKY81CKLHLQQSGS91FQYYFLQGNE
101-150101KSGGGYIVVD111PILRIGVDNH121VLPLDCVTLQ131TFLAKCLGPF141DEWESRLRVA
151-200151KESGYNMIHF161TPLQTLGLSR171SCYSLADQLE181LNPDFSRPSK191RYTWSDVGQL
201-250201VEKLKREWNI211LCITDVVYNH221TATNSKWILE231HPESAYNLVN241SPHLKPAWVL
251-300251DRALWHFSCD261VADGKYREKG271VPALIENDQH281MNCIRKIIWE291DIFPRIQLWE
301-350301FFQVDVHKAV311EQFRRLLSQE321NRRVTKSEPK331EHLKIIQDPE341YRRRGCAVDM
351-400351DTALATFIPH361DNGPAAIEEC371CNWFRKRLEE381LNSEKHHLTS391CHQEQAVNCL
401-450401LGNVFYERLA411GHGPKLGPVT421RKYPLVTRYF431TFPFGEMALS441AEEALIHLPD
451-500451KACFLMAHNG461WVMGDDPLRN471FAEPGSDVYL481RRELICWGDS491VKLRYGNKPE
501-550501DCPYLWAHMK511KYTEITATHF521QGVRLDNCHS531TPLHVAEYML541DAARKLQPNL
551-600551YVVAELFTGS561EELDNIFVTR571LGISSLIREA581MSAYNSHEEG591RLVYRYGGEP
601-650601VGSFVQPCLR611PLMPAIAHAL621FMDITHDNEC631PIVHRSAYDA641LPSTTVVSMA
651-700651CCASGSTRGY661DELVPHQISV671VAEERFYTKW681NPGASPADTG691DVNVHSGIIA
701-750701ARCAINRLHQ711ELGAKGFIQV721YVDQVDEDIV731AVTRHSPSIH741QSVVAVSRTA
751-800751FRNPKTSFYS761KEVPQMCIPG771KIEEVVLEAR781TIERNTKPYK791KDENSINGMP
801-850801NMTVELREHI811QLHESKIVRQ821AGVATKGPNE831YIQEIEFENL841SPGSVIIFRV
851-900851SLDPHAQVAV861GILRNHLTQF871SSHFKSGSLA881VDNADPILKI891PFASIASKLT
901-950901LAELNQVLYR911CESEEQEDGG921GCYDIPNWSS931LKYAGLQGLM941SVLAEIRPKN
951-1000951DLGHPFCENL961RSGDWMIDYV971SGRLISRSGS981IAEVGKWLQA991MFFYLKQIPR
1001-10501001YLIPCYFDAI1011LIGAYTTLLD1021VAWKQMSSFV1031QNGSTFVKHL1041SLGSVQMCGV
1051-11001051GKCPCLPLLS1061PSLLDVPCRL1071NEITKEKEQC1081CASLAAGLPH1091FSSGLFRCWG
1101-11501101RDTFIALRGM1111LLVTGRYLEA1121RNIILAFAST1131LRHGLIPNLL1141GEGTYARYNC
1151-12001151RDAVWWWLQC1161IQDYCRTVPN1171GLDILKCPVS1181RMYPTDDSAP1191LPAGTLDQPL
1201-12501201FEVIQEAMQR1211HMQGIQFRER1221NAGPQIDRNM1231KDEGFNITAG1241IDEETGFVYG
1251-13001251GNRFNCGTWM1261DKMGESDRAR1271NRGIPATPRD1281GSAVEIVGLC1291KSAVRWLLEL
1301-13501301SKKNIFPYHE1311VRVKRHGKVV1321AVSYDEWNRK1331IQNNFEKLFH1341VSEDPSDPNE
1351-14001351KHPNLVHKRG1361IYKDSYGASS1371PWCDYQLRPN1381FTIAMVVAPE1391LFTAEKAWKA
1401-14501401LEIAEKKLLG1411PLGMKTLDPD1421DMVYCGVYDN1431ALDNDNYNLA1441RGFNYHQGPE
1451-15001451WLWPIGYFLR1461AKLYFSKMMG1471PETAAKTVFL1481VKNVLSRHYV1491HLERSPWKGL
1501-15321501PELTNENGQY1511CPFSCETQAW1521SMAVVLETLY1531DL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 81 | - | - | - |
Deep-Palm: 0.11
|
|
| 126 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.83
Deep-Palm: 0.90
|
| 136 | - | - | - |
Deep-Palm: 0.96
|
|
| 172 | SWISSPALM DBPTM CYSMODDB | Glycogen debranching enzyme, glucanotransferase domain |
liver
(26165157)
| - |
GPS-Palm: 0.82
Deep-Palm: 0.89
|
| 212 | - | - | - |
Deep-Palm: 0.51
|
|
| 259 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.89
|
|
| 283 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.40
|
|
| 346 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.43
|
|
| 370 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.83
|
|
| 371 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.40
|
|
| 391 | - | - | - |
Deep-Palm: 0.58
|
|
| 399 | - | - | - |
Deep-Palm: 0.32
|
|
| 453 | - | - | - |
Deep-Palm: 0.87
|
|
| 486 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.92
|
|
| 502 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.61
|
|
| 528 | - | - | - |
Deep-Palm: 0.48
|
|
| 608 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.82
|
|
| 630 | - | - | - |
Deep-Palm: 0.08
|
|
| 651 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.70
|
|
| 652 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.65
|
|
| 703 | - | - | - |
GPS-Palm: 0.75
Deep-Palm: 0.92
|
|
| 767 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.70
Deep-Palm: 0.83
|
|
| 911 | - | - | - |
Deep-Palm: 0.93
|
|
| 922 | - | - | - |
Deep-Palm: 0.53
|
|
| 957 | - | - |
Liver
(37925639)
|
Deep-Palm: 0.71
|
|
| 1005 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.52
|
|
| 1048 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.95
|
|
| 1053 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.96
|
|
| 1055 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.76
Deep-Palm: 0.98
|
| 1068 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 1080 | - | - | - |
Deep-Palm: 0.93
|
|
| 1081 | - | - | - |
Deep-Palm: 0.91
|
|
| 1098 | - | - | - |
Deep-Palm: 0.95
|
|
| 1150 | - | - | - |
Deep-Palm: 0.24
|
|
| 1160 | - | - | - |
Deep-Palm: 0.05
|
|
| 1165 | - | - | - |
Deep-Palm: 0.19
|
|
| 1177 | - | - | - |
Deep-Palm: 0.60
|
|
| 1256 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.10
|
|
| 1290 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.97
|
|
| 1373 | - | - | - |
Deep-Palm: 0.42
|
|
| 1425 | - | - |
Liver
(34884899)
|
Deep-Palm: 0.11
|
|
| 1511 | - | - | - |
Deep-Palm: 0.77
|
|
| 1515 | - | - | - |
Deep-Palm: 0.28
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Testis
Specificity: 0.182
2/2 (100.0%)
1
Brain
Specificity: 0.091
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
6
Brain tissue (Mass)
Specificity: 0.545
6/56 (10.7%)
2
Liver tissue (Mass)
Specificity: 0.182
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.