Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F8VS14 | CNOT2 | CCR4-NOT transcription complex subunit 2 | Homo sapiens (Human) | 54 aa |
Protein Details: F8VS14 (CNOT2)
Protein Information
| Accession | F8VS14 |
|---|---|
| Protein Names | CCR4-NOT transcription complex subunit 2 |
| Gene Symbol | CNOT2 |
| Organism | Homo sapiens (Human) |
| Length | 54 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVRTDGHTLS11EKRNYQPPAL21SFPIPRVANV31ERSCTGDKQH41VWCFKKEVCR
51-5451GGRQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 34 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.63
|
| 43 | SWISSPALM DBPTM CYSMODDB | - | - | - |
Deep-Palm: 0.03
|
| 49 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 98 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 98 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |