Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F8VXK7 | CHST11 | Carbohydrate sulfotransferase 11 | Homo sapiens (Human) | 77 aa |
Protein Details: F8VXK7 (CHST11)
Protein Information
| Accession | F8VXK7 |
|---|---|
| Protein Names | Carbohydrate sulfotransferase 11 |
| Gene Symbol | CHST11 |
| Organism | Homo sapiens (Human) |
| Length | 77 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKPALLEVMR11MNRICRMVLA21TCLGSFILVI31FYFQSMLHPV41MRRNPFGVDI
51-7751CCRKGSRSPL61QELYNPIQVS71FKHSVSM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 15 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.83
|
|
| 22 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.29
|
|
| 51 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.62
|
|
| 52 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.68
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Jurkat T cell
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 35 | S → Cfs*50 | 0.001969 | DEL | Frame Shift Del | LGG |
| 64 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 121 | C → Y | 0.010870 | SNP | Missense Mutation | ACC |
| 230 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 331 | Y → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 343 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |