Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| F8WHW3 | Pip4p1 | Phosphatidylinositol-4,5-bisphosphate 4-phosphatase (EC 3.1.3.78) | Mus musculus (Mouse) | 277 aa |
Protein Details: F8WHW3 (Pip4p1)
Protein Information
| Accession | F8WHW3 |
|---|---|
| Protein Names | Phosphatidylinositol-4,5-bisphosphate 4-phosphatase (EC 3.1.3.78) |
| Gene Symbol | Pip4p1 |
| Organism | Mus musculus (Mouse) |
| Length | 277 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAADGERSPL11LSEAGDGGAG21GNGLAGPGGS31ATGPGGGLTP41SAPPYGAAFP
51-10051PFPEGHPAVL61PGEDPPPYSP71LTSPDSGSAP81MITCRVCQSP91INVEGKMHQH
101-150101VVKCGVCNEA111TPIKNAPPGK121KYVRCPCNCL131LICKVTSQRI141ACPRPYCKRI
151-200151INLGPVHPGP161LSPEPQPMGV171RVICGHCKNT181FLWTEFTDRT191LARCPHCRKV
201-250201SSIGRRYPRK211RCICCFLLGL221LLAVTATGLA231FGTWKHAQQY241GGIYAAWAFV
251-277251ILLAVLCLGR261ALYWACMKVS271HPVQNFS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 84 | - | - | - |
Deep-Palm: 0.26
|
|
| 87 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.08
|
|
| 104 | - | - | - |
Deep-Palm: 0.14
|
|
| 107 | - | - | - |
Deep-Palm: 0.13
|
|
| 125 | - | - | - |
Deep-Palm: 0.68
|
|
| 127 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.68
|
| 129 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.80
|
| 133 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
Deep-Palm: 0.35
|
| 142 | - | - | - |
Deep-Palm: 0.38
|
|
| 147 | - | - | - |
Deep-Palm: 0.44
|
|
| 174 | - | - | - |
Deep-Palm: 0.21
|
|
| 177 | - | - | - |
Deep-Palm: 0.12
|
|
| 194 | - | - | - |
Deep-Palm: 0.35
|
|
| 197 | - | - | - |
Deep-Palm: 0.49
|
|
| 212 | - | - | - |
Deep-Palm: 0.96
|
|
| 214 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.96
|
|
| 215 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 257 | - | - | - |
Deep-Palm: 0.90
|
|
| 266 | - | - | - |
Deep-Palm: 0.17
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.714
5
Brain tissue (Mass)
Specificity: 0.625
5/56 (8.9%)
1
Liver tissue (Mass)
Specificity: 0.125
1/8 (12.5%)
1
Neural Stem Cells (Mass)
Specificity: 0.125
1/1 (100.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.