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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
G3V4H1 RHOJ Ras homolog family member J Homo sapiens (Human) 153 aa

Protein Details: G3V4H1 (RHOJ)

Protein Information
AccessionG3V4H1
Protein NamesRas homolog family member J
Gene SymbolRHOJ
OrganismHomo sapiens (Human)
Length153 aa
IsoformsNo isoforms
Related PMIDs 31251020
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MNCKEGTDSS11CGCRGNDEKK21MLKCVVVGDG31AVGKTCLLMS41YANDAFPEEY
51-10051VPTVFDHYAV61TVTVGGKQHL71LGLYDTAGQE81DYNQLRPLSY91PNTDVFLICF
101-150101SVVWDLPPPH111PGMRMAANLC121GQAPAKKEGT131TRKELPLHGG141LPHHPLSPPN
151-153151TAH
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
3 - - -
GPS-Palm: 0.84
Deep-Palm: 0.01
11 - - -
Deep-Palm: 0.02
13 P-loop containing nucleoside triphosphate hydrolase - -
GPS-Palm: 0.67
Deep-Palm: 0.03
24 SWISSPALM DBPTM CYSMODDB Ras family P-loop containing nucleoside triphosphate hydrolase Small GTPase -
cerebral cortex (36430497)
GPS-Palm: 0.66
Deep-Palm: 0.97
36 P-loop containing nucleoside triphosphate hydrolase Small GTPase Rho Small GTPase Transforming protein P21 ras signature - -
Deep-Palm: 0.93
99 - - -
Deep-Palm: 0.49
120 - - -
GPS-Palm: 0.91
Deep-Palm: 0.95
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
LNCaP
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
11 C → C 0.002288 SNP Silent STAD
11 C → C 0.001887 SNP Silent UCEC
24 C → C 0.002506 SNP Silent COAD
37 L → Cfs*2 0.001764 DEL Frame Shift Del LUAD
108 Y → C 0.001887 SNP Missense Mutation UCEC
172 Y → C 0.002288 SNP Missense Mutation STAD