Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| G3X9K3 | Arfgef1 | Brefeldin A-inhibited guanine nucleotide-exchange protein … | Mus musculus (Mouse) | 1846 aa |
Protein Details: G3X9K3 (Arfgef1)
Protein Information
| Accession | G3X9K3 |
|---|---|
| Protein Names | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 (BIG1) (Brefeldin A-inhibited GEP 1) (ADP-ribosylation factor guanine nucleotide-exchange factor 1) |
| Gene Symbol | Arfgef1 |
| Organism | Mus musculus (Mouse) |
| Length | 1846 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MYEGKKTKNM11FLTRALEKIL21ADKEVKKAHH31SQLRKACEVA41LEEIKVETEK
51-10051QSPPHGEAKA61GSGTLPPVKS71KTNFIEADKY81FLPFELACQS91KCPRIVSTSL
101-150101DCLQKLIAYG111HLTGRAPDST121TPGKKLIDRI131IETICGCFQG141PQTDEGVQLQ
151-200151IIKALLTAVT161SQHIEIHEGT171VLQAVRTCYN181IYLASKNLIN191QTTAKATLTQ
201-250201MLNVIFARME211NQALQEAKQM221ERERHRQQQH231LLQSPVSHHE241PESPHLRYLP
251-300251PQTVDHINQE261HEGDLEPQTH271DVDKSLQDDT281EPENGSDISS291AENEQTEADQ
301-350301ATAAETLSKN311DILYDGDYEE321KPLDIVQSIV331EEMVNIIVGD341MGEGMAISAS
351-400351TEGNTGTVED361GSDSENIQAN371GIPGTPISVA381YTPSLPDDRL391SVSSNDTQES
401-450401GNSSGPSPGA411KFSHILQKDA421FLVFRSLCKL431SMKPLSDGPP441DPKSHELRSK
451-500451ILSLQLLLSI461LQNAGPVFRT471NEMFINAIKQ481YLCVALSKNG491VSSVPEVFEL
501-550501SLSIFLTLLS511NFKTHLKMQI521EVFFKEIFLY531ILETSTSSFD541HKWMVIQTLT
551-600551RICADAQSVV561DIYVNYDCDL571NAANIFERLV581NDLSKIAQGR591GSQELGMSNV
601-650601QELSLRKKGL611ECLVSILKCM621VEWSKDQYVN631PNSQTTLGQE641KPSEQEISEV
651-700651KHPETINRYG661SLNSLESTSS671SGIGSYSTQM681SGTDNPEQFE691VLKQQKEIIE
701-750701QGIDLFNKKP711KRGIQYLQEQ721GMLGTTPEDI731AQFLHQEERL741DSTQVGEFLG
751-800751DNDKFNKEVM761YAYVDQHDFS771GKDFVSALRL781FLEGFRLPGE791AQKIDRLMEK
801-850801FAARYLECNQ811GQTLFASADT821AYVLAYSIIM831LTTDLHSPQV841KNKMTKEQYI
851-900851KMNRGINDSK861DLPEEYLSAI871YNEIAGKKIS881MKETKELTIP891TKSTKQNVAS
901-950901EKQRRLLYNL911EMEQMAKTAK921ALMEAVSHVQ931APFTSATHLE941HVRPMFKLAW
951-1000951TPFLAAFSVG961LQDCDDTEVA971SLCLEGIRCA981IRIACIFSIQ991LERDAYVQAL
1001-10501001ARFTLLTVSS1011GITEMKQKNI1021DTIKTLITVA1031HTDGNYLGNS1041WHEILKCISQ
1051-11001051LELAQLIGTG1061VKPRYISGTV1071RGREGSLTGT1081KDQAPDEFVG1091LGLVGGNVDW
1101-11501101KQIASIQESI1111GETSSQSVVV1121AVDRIFTGST1131RLDGNAIVDF1141VRWLCAVSMD
1151-12001151ELLSTTHPRM1161FSLQKIVEIS1171YYNMGRIRLQ1181WSRIWEVIGD1191HFNKVGCNPN
1201-12501201EDVAIFAVDS1211LRQLSMKFLE1221KGELANFRFQ1231KDFLRPFEHI1241MKRNRSPTIR
1251-13001251DMVVRCIAQM1261VNSQAANIRS1271GWKNIFSVFH1281LAASDQDESI1291VELAFQTTGH
1301-13501301IVTLVFEKHF1311PATIDSFQDA1321VKCLSEFACN1331AAFPDTSMEA1341IRLIRHCAKY
1351-14001351VSDRPQAFKE1361YTSDDMSVAP1371EDRVWVRGWF1381PILFELSCII1391NRCKLDVRTR
1401-14501401GLTVMFEIMK1411TYGHTYEKHW1421WQDLFRIVFR1431IFDNMKLPEQ1441QTEKAEWMTT
1451-15001451TCNHALYAIC1461DVFTQYLEVL1471SDVLLDDIFA1481QLYWCVQQDN1491EQLARSGTNC
1501-15501501LENVVILNGE1511KFTLEIWDKT1521CNCTLDIFKT1531TIPHALLTWR1541PTSGEAEPPS
1551-16001551PSAVSEKPLD1561AISQKSVDIH1571DSIQPRSSDN1581RQQAPLVSVS1591TVSEEVSKVK
1601-16501601STAKFPEQKL1611FAALLIKCVV1621QLELIQTIDN1631IVFFPATSKK1641EDAENLAAAQ
1651-17001651RDAVDFDVRV1661DTQDQGMYRF1671LTSQQLFKLL1681DCLLESHRFA1691KAFNSNNEQR
1701-17501701TALWKAGFKG1711KSKPNLLKQE1721TSSLACGLRI1731LFRMYMDESR1741VSAWEEVQQR
1751-18001751LLNVCREALS1761YFLTLTSESH1771REAWTNLLLL1781FLTKVLKISD1791SRFKAHASFY
1801-18461801YPLLCEIMQF1811DLIPELRAVL1821RRFFLRIGIV1831FQISQPPEQE1841LGINRQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 37 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.97
|
|
| 88 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.76
|
|
| 92 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.82
|
|
| 102 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.82
|
|
| 135 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.87
|
|
| 137 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.90
|
|
| 178 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.29
|
|
| 428 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.87
|
|
| 483 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.74
|
|
| 553 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.04
|
|
| 568 | - | - | - |
Deep-Palm: 0.39
|
|
| 612 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 619 | - | - | - |
Deep-Palm: 0.88
|
|
| 808 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.84
|
|
| 964 | - | - | - |
Deep-Palm: 0.66
|
|
| 973 | - | - | - |
Deep-Palm: 0.54
|
|
| 979 | - | - | - |
Deep-Palm: 0.66
|
|
| 985 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.79
|
|
| 1047 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.94
|
|
| 1145 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.84
Deep-Palm: 0.64
|
| 1197 | - | - | - |
Deep-Palm: 0.15
|
|
| 1256 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.19
|
|
| 1323 | - | - | - |
Deep-Palm: 0.27
|
|
| 1329 | - | - | - |
Deep-Palm: 0.60
|
|
| 1347 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.78
|
|
| 1388 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.79
|
|
| 1393 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.74
|
|
| 1452 | - | - | - |
Deep-Palm: 0.09
|
|
| 1460 | - | - | - |
Deep-Palm: 0.12
|
|
| 1485 | - | - | - |
Deep-Palm: 0.27
|
|
| 1500 | - | - | - |
Deep-Palm: 0.44
|
|
| 1521 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.23
|
|
| 1523 | - | - | - |
Deep-Palm: 0.21
|
|
| 1618 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.83
|
|
| 1682 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.83
|
|
| 1726 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.94
|
|
| 1755 | - | - | - |
Deep-Palm: 0.96
|
|
| 1805 | - | - | - |
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Liver
Specificity: 0.667
2/2 (100.0%)
1
Brain
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.