Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| G3X9V2 | Ctnnd1 | Catenin delta 1 | Mus musculus (Mouse) | 932 aa |
Protein Details: G3X9V2 (Ctnnd1)
Protein Information
| Accession | G3X9V2 |
|---|---|
| Protein Names | Catenin delta 1 |
| Gene Symbol | Ctnnd1 |
| Organism | Mus musculus (Mouse) |
| Length | 932 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31772009 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDDSEVESTA11SILASVKEQE21AQFEKLTRAL31EEERRHVSAQ41LERVRVSPQD
51-10051ANSLMANGTL61TRRHQNGRFV71GDADLERQKF81SDLKLNGPQD91HNHLLYSTIP
101-150101RMQEPGQIVE111TYTEEDPEGA121MSVVSVETTD131DGTTRRTETT141VKKVVKTMTT
151-200151RTVQPVPMGP161DGLPVDASAV171SNNYIQTLGR181DFRKNGNGGP191GPYVGQAGTA
201-250201TLPRNFHYPP211DGYGRHYEDG221YPGGSDNYGS231LSRVTRIEER241YRPSMEGYRA
251-300251PSRQDVYGPQ261PQVRVGGSSV271DLHRFHPEPY281GLEDDQRSMG291YDDLDYGMMS
301-350301DYGTARRTGT311PSDPRRRLRS321YEDMIGEEVP331PDQYYWAPLA341QHERGSLASL
351-400351DSLRKGMPPP361SNWRQPELPE371VIAMLGFRLD381AVKSNAAAYL391QHLCYRNDKV
401-450401KTDVRKLKGI411PILVGLLDHP421KKEVHLGACG431ALKNISFGRD441QDNKIAIKNC
451-500451DGVPALVRLL461RKARDMDLTE471VITGTLWNLS481SHDSIKMEIV491DHALHALTDE
501-550501VIIPHSGWER511EPNEDCKPRH521IEWESVLTNT531AGCLRNVSSE541RSEARRKLRE
551-600551CDGLVDALIF561IVQAEIGQKD571SDSKLVENCV581CLLRNLSYQV591HREIPQAERY
601-650601QEALPTVANS611TGPHAASCFG621AKKGKGKKPT631EDPANDTVDF641PKRTSPARGY
651-700651ELLFQPEVVR661IYISLLKESK671TPAILEASAG681AIQNLCAGRW691TYGRYIRSAL
701-750701RQEKALSAIA711ELLTSEHERV721VKAASGALRN731LAVDARNKEL741IGKHAIPNLV
751-800751KNLPGGQQNS761SWNFSEDTVV771SILNTINEVI781AENLEAAKKL791RETQGIEKLV
801-850801LINKSGNRSE811KEVRAAALVL821QTIWGYKELR831KPLEKEGWKK841SDFQVNLNNA
851-900851SRSQSSHSYD861DSTLPLIDRN871QKSDKKPDRE881EIPMSNMGSN891TKSLDNNYST
901-932901LNERGDHNRT911LDRSGDLGDM921EPLKGAPLMQ931KI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 394 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.96
|
|
| 429 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.95
|
|
| 450 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.98
|
|
| 516 | - | - | - |
Deep-Palm: 0.16
|
|
| 533 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.94
|
| 551 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
|
| 579 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.95
|
|
| 581 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 618 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.94
|
| 686 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
NSC
Specificity: 0.071
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.846
11
Brain tissue (Mass)
Specificity: 0.786
11/56 (19.6%)
2
Liver tissue (Mass)
Specificity: 0.143
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.