Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| G3X9V4 | Grin2b | Glutamate receptor | Mus musculus (Mouse) | 1482 aa |
Protein Details: G3X9V4 (Grin2b)
Protein Information
| Accession | G3X9V4 |
|---|---|
| Protein Names | Glutamate receptor |
| Gene Symbol | Grin2b |
| Organism | Mus musculus (Mouse) |
| Length | 1482 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKPSAECCSP11KFWLVLAVLA21VSGSKARSQK31SAPSIGIAVI41LVGTSDEVAI
51-10051KDAHEKDDFH61HLSVVPRVEL71VAMNETDPKS81IITRICDLMS91DRKIQGVVFA
101-150101DDTDQEAIAQ111ILDFISAQTL121TPILGIHGGS131SMIMADKDES141SMFFQFGPSI
151-200151EQQASVMLNI161MEEYDWYIFS171IVTTYFPGYQ181DFVNKIRSTI191ENSFVGWELE
201-250201EVLLLDMSLD211DGDSKIQNQL221KKLQSPIILL231YCTKEEATYI241FEVANSVGLT
251-300251GYGYTWIVPS261LVAGDTDTVP271SEFPTGLISV281SYDEWDYGLP291ARVRDGIAII
301-350301TTAASDMLSE311HSFIPEPKSS321CYNTHEKRIY331QSNMLNRYLI341NVTFEGRNLS
351-400351FSEDGYQMHP361KLVIILLNKE371RKWERVGKWK381DKSLQMKYYV391WPRMCPETEE
401-450401QEDDHLSIVT411LEEAPFVIVE421SVDPLSGTCM431RNTVPCQKRI441ISENKTDEEP
451-500451GYIKKCCKGF461CIDILKKISK471SVKFTYDLYL481VTNGKHGKKI491NGTWNGMIGE
501-550501VVMKRAYMAV511GSLTINEERS521EVVDFSVPFI531ETGISVMVSR541SNGTVSPSAF
551-600551LEPFSADVWV561MMFVMLLIVS571AVAVFVFEYF581SPVGYNRCLA591DGREPGGPSF
601-650601TIGKAIWLLW611GLVFNNSVPV621QNPKGTTSKI631MVSVWAFFAV641IFLASYTANL
651-700651AAFMIQEEYV661DQVSGLSDKK671FQRPNDFSPP681FRFGTVPNGS691TERNIRNNYA
701-750701EMHAYMGKFN711QRGVDDALLS721LKTGKLDAFI731YDAAVLNYMA741GRDEGCKLVT
751-800751IGSGKVFAST761GYGIAIQKDS771GWKRQVDLAI781LQLFGDGEME791ELEALWLTGI
801-850801CHNEKNEVMS811SQLDIDNMAG821VFYMLGAAMA831LSLITFICEH841LFYWQFRHCF
851-900851MGVCSGKPGM861VFSISRGIYS871CIHGVAIEER881QSVMNSPTAT891MNNTHSNILR
901-950901LLRTAKNMAN911LSGVNGSPQS921ALDFIRRESS931VYDISEHRRS941FTHSDCKSYN
951-1000951NPPCEENLFS961DYISEVERTF971GNLQLKDSNV981YQDHYHHHHR991PHSIGSTSSI
1001-10501001DGLYDCDNPP1011FTTQPRSISK1021KPLDIGLPSS1031KHSQLSDLYG1041KFSFKSDRYS
1051-11001051GHDDLIRSDV1061SDISTHTVTY1071GNIEGNAAKR1081RKQQYKDSLK1091KRPASAKSRR
1101-11501101EFDEIELAYR1111RRPPRSPDHK1121RYFRDKEGLR1131DFYLDQFRTK1141ENSPHWEHVD
1151-12001151LTDIYKERSD1161DFKRDSVSGG1171GPCTNRSHLK1181HGTGDKHGVV1191GGVPAPWEKN
1201-12501201LTNVDWEDRS1211GGNFCRSCPS1221KLHNYSSTVA1231GQNSGRQACI1241RCEACKKAGN
1251-13001251LYDISEDNSL1261QELDQPAAPV1271AVSSNASTTK1281YPQSPTNSKA1291QKKNRNKLRR
1301-13501301QHSYDTFVDL1311QKEEAALAPR1321SVSLKDKGRF1331MDGSPYAHMF1341EMPAGESSFA
1351-14001351NKSSVTTAGH1361HHNNPGSGYM1371LSKSLYPDRV1381TQNPFIPTFG1391DDQCLLHGSK
1401-14501401SYFFRQPTVA1411GASKTRPDFR1421ALVTNKPVVS1431ALHGAVPGRF1441QKDICIGNQS
1451-14821451NPCVPNNKNP1461RAFNGSSNGH1471VYEKLSSIES1481DV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
Deep-Palm: 0.04
|
|
| 8 | - | - | - |
Deep-Palm: 0.05
|
|
| 86 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.59
|
|
| 232 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.89
|
|
| 321 | - | - | - |
Deep-Palm: 0.06
|
|
| 395 | - | - | - |
Deep-Palm: 0.25
|
|
| 429 | - | - | - |
Deep-Palm: 0.61
|
|
| 436 | - | - | - |
Deep-Palm: 0.50
|
|
| 456 | - | - | - |
Deep-Palm: 0.61
|
|
| 457 | - | - | - |
Deep-Palm: 0.63
|
|
| 461 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.53
|
|
| 588 | - | - | - |
Deep-Palm: 0.67
|
|
| 746 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.95
|
|
| 801 | - | - | - |
Deep-Palm: 0.59
|
|
| 838 | - | - | - |
Deep-Palm: 0.14
|
|
| 849 | - | - | - |
Deep-Palm: 0.05
|
|
| 854 | - | - | - |
Deep-Palm: 0.11
|
|
| 871 | SWISSPALM DBPTM CYSMODDB | N-methyl D-aspartate receptor 2B3 C-terminus |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.85
|
| 946 | - | - | - |
Deep-Palm: 0.06
|
|
| 954 | SWISSPALM DBPTM CYSMODDB | N-methyl D-aspartate receptor 2B3 C-terminus |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.16
|
| 1006 | - | - | - |
Deep-Palm: 0.20
|
|
| 1173 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.76
|
|
| 1215 | - | - | - |
Deep-Palm: 0.43
|
|
| 1218 | - | - | - |
Deep-Palm: 0.41
|
|
| 1239 | - | - | - |
Deep-Palm: 0.60
|
|
| 1242 | - | - | - |
Deep-Palm: 0.72
|
|
| 1245 | - | - | - |
Deep-Palm: 0.61
|
|
| 1394 | - | - |
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.25
|
|
| 1445 | - | - | - |
Deep-Palm: 0.21
|
|
| 1453 | - | - | - |
Deep-Palm: 0.07
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 1.000
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.