Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| G5E896 | Edc4 | Enhancer of mRNA-decapping protein 4 | Mus musculus (Mouse) | 1406 aa |
Protein Details: G5E896 (Edc4)
Protein Information
| Accession | G5E896 |
|---|---|
| Protein Names | Enhancer of mRNA-decapping protein 4 |
| Gene Symbol | Edc4 |
| Organism | Mus musculus (Mouse) |
| Length | 1406 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASCASIDIE11DATQHLRDIL21KLDRPAGGSN31AESQRPSSAY41NGDLNGLLVP
51-10051DPLSSGDGNS61TNKPGIRTMP71PINLQEKQVI81CLSGDDSSTC91IGILAKEVEI
101-150101VASSDSSISS111KARGSNKVKI121QPVAKYDWEQ131KYYYGNLIAV141SNSFLAYAIR
151-200151AANNGSAMVR161VISVSTSERT171LLKGFTGSVA181DLAFAHLNSP191QLACLDEAGN
201-250201LFVWRLALVK211GKIQEEILVH221IRQPEGTALN231HFRRIIWCPF241IPEESEDCCE
251-300251ESSPTVALLH261EDRAEVWDLD271MLRSSHNTWP281VDVSQIKQGF291IVVKGHSTCL
301-350301SEGALSPDGT311VLATASHDGF321VKFWQIYIEG331QDEPRCLHEW341KPHDGRPLSC
351-400351LLFCDNHKKQ361DPEVPFWRFL371ITGADQNREL381KMWCTVSWTC391LQTIRFSPDI
401-450401FSSVSVPPSL411KVCLDLSAEY421LILSDVQRKV431LYVMELLQNQ441DEGRACFSSI
451-500451SEFLLTHPVL461SFGIQVVSRC471RLRHTEVLPA481EEENDSLGTE491SSHGAGALES
501-550501AAGVLIKLFC511VHTKALQDVQ521IRFQPQLNPD531VVAPLSTHTA541HEDFTFGESR
551-600551PELGSEGLAS561AAHGSQPDLR571RIVELPAPAD581FLSLSSETKP591KLMTPDAFMT
601-650601PTASLQQISA611SPSSSSSSSS621SSSSSSSSSS631SSLTAVSAVS641SSSAMDPSLP
651-700651RPPEELTLSP661KLQLDGSLTL671NSSSSSLQAS681PRSLLPGLLP691GPADKLISKG
701-750701PGQVSTAASA711LSLDLQEVEP721LGLPQASPSR731TRSPDVISSA741STALSQDIPE
751-800751IASEALSRGF761GSSVPEGLIE771PDSMASAASA781LHLLSPRPRQ791GPELGSQLGL
801-850801DGGPGDGDRH811STPSLLEAAL821TQEVATPDSQ831VWPTAPDITR841ETCSTLTESP
851-900851RNGLQEKHKS861LAFHRPPYHL871LQQRDSQDTS881AEQSDHDDEV891ASLASASGGF
901-950901GSKIPTPRLP911SKDWKTKGSP921RTSPKLKRKS931KKDDGDSAVG941SRLTEHQVAE
951-1000951PPEDWPALIW961QQQRELAELW971HNQEELLQRL981CAQLEGLQST991VTDHVERALE
1001-10501001TRHEQEQRRL1011ERALAEGQQR1021GGQLQEQLTQ1031QLSQALSSAV1041AGRLERSVRD
1051-11001051EIKKTVPPCV1061SRSLEPVAGQ1071LSNSVATKLT1081AVEGSMKENI1091SKLLKSKNLT
1101-11501101DAIARAAADT1111LQGPMQAAYR1121EAFQSVVLPA1131FEKSCQAMFQ1141QINDSFRLGT
1151-12001151QEYLQQLESH1161MKSRKAREQE1171AREPVLAQLR1181GLVSTLQSAT1191EQMAATVSSS
1201-12501201VRAEVQHQLH1211VAVGSLQESI1221LAQVQRIVKG1231EVSVALKEQQ1241ATVTSSIMQA
1251-13001251MRSAAGTPVP1261SAHLDCQAQQ1271AHILQLLQQG1281HLNQAFQQAL1291TAADLNLVLY
1301-13501301VCETVDPAQV1311FGQPPCPLSQ1321PVLLSLIQQL1331ASDLGTRSDL1341KLSYLEEAVM
1351-14001351HLDHSDPITR1361DHMGSVMAQV1371RQKLFQFLQA1381DPHNSLSKAA1391RRLSLMLHGL
1401-14061401VTPSLP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
|
| 81 | - | - | - |
Deep-Palm: 0.68
|
|
| 90 | - | - | - |
Deep-Palm: 0.92
|
|
| 194 | - | - | - |
Deep-Palm: 0.86
|
|
| 238 | - | - | - |
Deep-Palm: 0.25
|
|
| 248 | - | - | - |
Deep-Palm: 0.24
|
|
| 249 | - | - | - |
Deep-Palm: 0.35
|
|
| 299 | - | - | - |
Deep-Palm: 0.95
|
|
| 336 | - | - | - |
Deep-Palm: 0.14
|
|
| 350 | - | - | - |
Deep-Palm: 0.43
|
|
| 354 | - | - | - |
Deep-Palm: 0.59
|
|
| 384 | - | - | - |
Deep-Palm: 0.26
|
|
| 390 | SWISSPALM DBPTM CYSMODDB | WD40 region of Ge1 enhancer of mRNA-decapping protein |
Forebrain
(28680068)
| - |
Deep-Palm: 0.33
|
| 413 | - | - | - |
Deep-Palm: 0.97
|
|
| 446 | - | - | - |
Deep-Palm: 0.86
|
|
| 470 | - | - | - |
Deep-Palm: 0.93
|
|
| 510 | - | - | - |
Deep-Palm: 0.95
|
|
| 843 | - | - | - |
Deep-Palm: 0.60
|
|
| 981 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
| - |
Deep-Palm: 0.92
|
| 1059 | - | - | - |
Deep-Palm: 0.96
|
|
| 1135 | - | - | - |
Deep-Palm: 0.41
|
|
| 1266 | - | - | - |
Deep-Palm: 0.76
|
|
| 1302 | - | - | - |
Deep-Palm: 0.94
|
|
| 1316 | - | - | - |
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.